Gene Sfri_3949 details

Gene Information

• Locus tag: Sfri_3949
• ID: 4280840
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: +
• Start bp: 4711490
• End bp: 4712044
• Gene Length: 555 bp
• Protein Length: 184 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 638136770
• Product: phospholipid/glycerol acyltransferase
• Protein accession: YP_752613
• Protein GI: 114565099
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase
• TIGRFAM ID: [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTCAGTT CACTTTGCTT AGGATTACTC AAAATACTGG GTTGGAAATT TGACGGCCAA 
CTCGATAAAA CTAAGCCATG CGTCATTATT GTTGGCCCAC ATACCAGTAA CTGGGATTTC 
ATCATTGGTA TTATCGCCCG CAGTGCCTTA GGCACCAAAA TCCACTTTTT AGGTAAGCAT 
CAGCTGTTTA TTCCGCCTTG GGGATGGCTT TTTCGCGCCA TGGGCGGCAG CCCTGTCGAT 
AGACGTAAAT ACAATAACTT AGTTGATGGT GTGGTGCTGT TATTCCAACA AGATCCACGG 
TATAAACTGG CCTTAGCTCC TGAAGGGACA CGTAGCCCAG TAACCCGCTG GAAAAGTGGT 
TTTTATCATA TTGCAGCCAA AGCGGATGTT GATATAGTGC CAATCGGATT AGATTTTGGC 
CGCAAAGCGG TTGTGATTGC CAAACCGTTA AGACCGACGG GAGATATTGA ACGCGAAATA 
AATCAGTTAA TGGATTTTTA CCGTTCAATC AAAGGTTATC ATCCAAAAAT GGTTCCTGAT 
TATCAGCAGA AATAG 

 

Protein sequence

MFSSLCLGLL KILGWKFDGQ LDKTKPCVII VGPHTSNWDF IIGIIARSAL GTKIHFLGKH 
QLFIPPWGWL FRAMGGSPVD RRKYNNLVDG VVLLFQQDPR YKLALAPEGT RSPVTRWKSG 
FYHIAAKADV DIVPIGLDFG RKAVVIAKPL RPTGDIEREI NQLMDFYRSI KGYHPKMVPD 
YQQK