| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3932 |
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| Symbol | |
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| ID | 4280823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 4692170 |
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| End bp | 4693285 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638136753 |
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| Product | ADP-heptose:LPS heptosyltransferase-like protein |
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| Protein accession | YP_752596 |
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| Protein GI | 114565082 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.339636 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCAATAG TGTCTATAAA GCAATTGCAA ACATGTCAAC GCTTACTGTT TATTTCGCCA
GTTGCGTTAG GTGACTTTCT TTACTTAAAA ACCTTTCTTA TCGCTTTAAA AAAGCAATAT
GCTCATATTG AAATCGACAT ATGGTTAGAT GATATTCGTT GTAATAGTGA TAGCTGGCGC
TTATCTAGAA GCAAAATTTT GCAACAATGG ATGGATACAG AGGGTGCCTT TAAGCTCACT
TACGGCTGCA CTGATTCAAA ATTAGCAATG CAAAGCCATG TGGAGCAAGC CAAACTGCGT
AAGTATGACA TTATTTTTTG TCATTCTGTC AGTAAAAGTC GACAATATTC ACAAATCGCT
CGCAGCATAA ACGACAAAGC GTTTATCGTG TCGAGTATCC CTAAAAGTGC TTCATTTGGA
TGGTTAAACA AGATATTTTT TCGCCATTCA GACCATACTT TTATTTTAGA TGAGAGTAAC
TTACCTAAGT CGCACCACAT TACTGACAGA TACAATATGA TATTTAGTGA AGTTTTGGGG
CTTACCTTAA CTTCCGAGCA ATTAATGCCG ACGTTAAAGA CCCCAGACGC AATTGAACCC
ATTACTCAGT CGTGGTTAAA CTCCAAATTT AGTGACCCAG AAAAACAAGG GAAACTCATA
TTTTTAAATC ATTTATCAAC CAATGAGAAA AAAGATTGGA AATTATCACA ATTATTCTCC
CTCATTGAAA AAATATCGGC AATTGATTCT AGCCAACGTT TCATTATTAA TGTCACTCAA
GAAAACTTTG ACTCTGTTAG TATTGAAACT GAAAAATTTA CGGCTCGAAC AAATACGCAA
ACGGCTGTTT TCACCGTTAA CGAACATTTT TTTGAACTAC CATCACTCAT TGCACACTCC
GATTTTGTGA TAACAGTCGA TACGGCAATA TTGCACTTTG CTTTTGCTGC TCAACGTCCT
TTATTAGCAA TGATGCGTGA GAAAAAGCCT TATTGGGCAC CACCAGAAAG TGAGGTATCG
CATGTCATGT ATGCAACAGA AGGTAGAGGC CACATTGAAG ACATCAGCGT TGACCGAGTA
TTCCAACAAT ATAAAAAAAT GAACTCTCTC GGTTAA
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| Protein sequence | MPIVSIKQLQ TCQRLLFISP VALGDFLYLK TFLIALKKQY AHIEIDIWLD DIRCNSDSWR
LSRSKILQQW MDTEGAFKLT YGCTDSKLAM QSHVEQAKLR KYDIIFCHSV SKSRQYSQIA
RSINDKAFIV SSIPKSASFG WLNKIFFRHS DHTFILDESN LPKSHHITDR YNMIFSEVLG
LTLTSEQLMP TLKTPDAIEP ITQSWLNSKF SDPEKQGKLI FLNHLSTNEK KDWKLSQLFS
LIEKISAIDS SQRFIINVTQ ENFDSVSIET EKFTARTNTQ TAVFTVNEHF FELPSLIAHS
DFVITVDTAI LHFAFAAQRP LLAMMREKKP YWAPPESEVS HVMYATEGRG HIEDISVDRV
FQQYKKMNSL G
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