Gene Sfri_3923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3923 
Symbol 
ID4280814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp4683630 
End bp4684088 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content39% 
IMG OID638136744 
Producthypothetical protein 
Protein accessionYP_752587 
Protein GI114565073 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.367031 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCTGT CACGTAAAAG TTGGAACTAT ATTATTATTG GTGCCAGTGT ATTTATGATT 
GCGGTATTGT CTTTTATCAA TGATAAAACC GCCGATGTCC CAGATGATAC AGTGCCTTTA
TTTGATCCGC AGCTGCCGTT GAAACAATTA CAACTTGATG GTATTTGGCT AAGTCAACAA
GACGGACAGT GGCAGTGTCA TTCGCAGGTG CTCAATTGTC AGCAATGGGC TTTATCATGG
CAAAATATTA GTGTATCACC ATTAAAAAAT CAGCCTGAAC ATAGCCTTAA AGAGCAAACT
CTGTCTATTG CCATCGATAA TATGCAAACG ACACAATTAT GGCGCTATTT CCCAAATGAA
GGTTTGTTGC AATCATCTAG TCAAAATTGG TATCTAGTAC CGCCGAGTTT ACGAGCTGGG
TTACAACCTA TATTAGCCAT ACCTCCTCAA TCAAAATAA
 
Protein sequence
MALSRKSWNY IIIGASVFMI AVLSFINDKT ADVPDDTVPL FDPQLPLKQL QLDGIWLSQQ 
DGQWQCHSQV LNCQQWALSW QNISVSPLKN QPEHSLKEQT LSIAIDNMQT TQLWRYFPNE
GLLQSSSQNW YLVPPSLRAG LQPILAIPPQ SK