| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3901 |
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| Symbol | |
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| ID | 4280792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 4656670 |
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| End bp | 4657347 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638136722 |
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| Product | two component transcriptional regulator, winged helix family protein |
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| Protein accession | YP_752565 |
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| Protein GI | 114565051 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGTATTT TATTAGTAGA AGACGATAAA ATGATTGGCG ATGCCATGCA AAGCGCCTTA
AAAGATGTCG CCTATGCGGT CGATTGGATA TGCGACGGCG AAGCGGCCTT ACACAGTTTA
CGTTGCCAGC AATATGATGT GGTGTTGCTC GACCTTGGCT TACCGAAACT GGATGGTTTG
CAAGTAATGC AATATATTCG AGCTCAGCAT CCCGCACTGG CGGTGATCAT TCTTACCGCC
AGAGACAGCC TAGAAGACCG AGTCAAAGGG CTCGATTTAG GTGCCGATGA TTATCTCGTT
AAGCCCTTCG ATATAACCGA ACTACTGGCA CGCATTCGTG CAGTAACAAG GCGCAATGCC
AACCAACATA CATCAGAATT AACCAATAAT ATTGTTTGGC TAAATCCAGC CACACATGAA
GCCAAAACCC TCACTCAAGA TAATATTTTA CTGTCTAACC GCGAGTTCGC CCTACTGCAA
ACATTGCTTA TTCGACCCGG TTCGATTCAT TCAAAAAGTG ATTTAGAAGA ACGAATTTAT
GGCTGGGGTG AAGAGGTAGA AAGTAATGCT GTAGAGTTTT TAATTCATTG TTTGCGTAAA
AAATTGGGTA CAGAAACCAT TAAAAATGTC AGAGGTGTAG GATGGATGGT GTCAAAAAAC
GCCCCAGTAA TTCGTTAA
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| Protein sequence | MRILLVEDDK MIGDAMQSAL KDVAYAVDWI CDGEAALHSL RCQQYDVVLL DLGLPKLDGL
QVMQYIRAQH PALAVIILTA RDSLEDRVKG LDLGADDYLV KPFDITELLA RIRAVTRRNA
NQHTSELTNN IVWLNPATHE AKTLTQDNIL LSNREFALLQ TLLIRPGSIH SKSDLEERIY
GWGEEVESNA VEFLIHCLRK KLGTETIKNV RGVGWMVSKN APVIR
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