Gene Sfri_3861 details

Gene Information

• Locus tag: Sfri_3861
• ID: 4280752
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: -
• Start bp: 4611232
• End bp: 4611771
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 638136682
• Product: hypothetical protein
• Protein accession: YP_752525
• Protein GI: 114565011

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGGTGC TTTTTATAAG CTTCACTTTA GCCGCTATTC TGGCTTATCT TTGGTATGCC 
AGTTTACTCA AAAAACGCAC TTCAGCCATT GAAGCGCTAA AAGTGATCGA CTCAAAAATT 
GATAAAAGAC TGACATTGTT TACCGAGCTA TGTCAGGAAA AACCATCTTA TCCACGCCCT 
TTAACAGATG ACCAACAAGC CCAGTTGGAG CTACTAAAAC AGTTACAGCC CGAACACGAT 
TGGGAACAAC CGATTGAAGA GTCAAATATG GCTGGTGGCT CGTTGTCTGT ATCGATAGCC 
GCTTGGCAAC AGATTGATCA AGGTTTAGAA GCATTATTAG CTACGGTGAA TAAAGACAAA 
CTGTGTGCCG ATCAGCTCGC CGAATATATA CAGCTAGAGC TCGACTTTGT CCACGCGGAA 
GACTTTTACC GTAAAGCCGT AGACGAGTTA AACAGTGGGG TTAAAATTTT TCCCGGTTCG 
GCAGTAGCAA AGTTCGCCCG TATCGCGCCG ATGCCGATAT TCGATCAAGT GCAGGAATAG 

 

Protein sequence

MQVLFISFTL AAILAYLWYA SLLKKRTSAI EALKVIDSKI DKRLTLFTEL CQEKPSYPRP 
LTDDQQAQLE LLKQLQPEHD WEQPIEESNM AGGSLSVSIA AWQQIDQGLE ALLATVNKDK 
LCADQLAEYI QLELDFVHAE DFYRKAVDEL NSGVKIFPGS AVAKFARIAP MPIFDQVQE