Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3852 |
Symbol | |
ID | 4280743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 4601031 |
End bp | 4602434 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638136673 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_752516 |
Protein GI | 114565002 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAACAAG TTGCCTTTCG TTGGATAGAT AAGTATTTAA TTAGCGTAAA GTTACATGAA AATTTTCTTG TTCTTTTTTT TACTGCTGTG CTTGCCGTTG TCGTCATGGG CATTTGTTTT GCTGACGCGG CGTCTTCACA AAGAACAATA GAAGCACAAA AACAAGTTGA TGTGATTGCC CAATTGGCAT CGGCGACTCA GATATCAGCA TCTGATCTGG CGCCCTTACT GCAAAATACA GCGATTAATA TTGGCCTTAA TACTGATATT TCGGCTCAGG TTTCAGGGCA AGACTATTCA TTAAGTTATG TTGATGACAC TAATTTTCTG ACTGGGTTAG GTTTATGGCA CATCACTGCC ATTAGCTTGA GTTTATTGTT GATGTTTGTT TGCTCTTATT ATGTAAATAC CTTCATCGGT GGCAGTCTAT TCGATATTTA TGGAGCATTG AAAAGGTTGG CCGAAGGGGA TCTTGCATCT CGTATTGGTT ATGCGCCTGC GCGTAATGAA TTTAATTTGA TTGCAAGAAC CGTTGATAGG GTCACTGAAC GTGAACATCT GTTGGTGAAA ACCACTCAAG AAGCAGTTGC TTTGATCCAA CAAATTAGTG CTCAGTTACG TGTGCGTAGT GATGAAAATA CTCAGTTGGC CAGCGTGCAG CAAGACCGCA TTGATTCGTT AGCCAGTGCA ACGGAAGAAA TGGCAGTGTC GATTCGAGAA GTCGCTAGCC ATGCTCAAGA ATCATCTACG CAAATATCGC GTGCAACGGA GAAAACCACA CAAGGCCAAG CTCAGATCAA AAAAACCTTG GTTGAGATTA ATCAATTAGC AGGGGAAGTA CGTGGTACCT CAGTTGCTGT TGCAGAACTT GATTCTAGCG CGACTGAAAT TGGTGAGGTT ATTGCAACGA TTAATGCCAT TTCTGACCAA ACCAACTTGC TAGCCCTTAA TGCTGCTATT GAAGCGGCAA GAGCAGGCGA ACAGGGACGT GGATTCTCAG TGGTTGCAGA TGAAGTAAGA ACCTTAGCGG GAAGAACTCA AGCTGCGACC GTTGAAATTC AAAAAATTAT TGAAACGCTA CAAACCAATA GCCGTGGTGT GATGAACGTG ATGGCGAAAA CGGTAAAAGA AGCTGAATCA AGCGAACAGT TAATGACAAG TGCAAGTCAA AATATTAGTG AAATCGCAGA GCAAAACCAG CATATTTCAG ATAGAAGTTT GGAAATTGCA GCCGCTGCCG AGGAACAAGG CGCTGTGGCT GATAATATTG CCAGTGATGT TGATTCTGTC AGAAGTAGTT CTATTCAAGT GATGGAGTTA GTGAATATGA CAGCAAAAGA AATCGAGAGT TTGAGCCGTC AGGCGGATGT GCTGGAAGGT TTGATGAAGG ATTTGATTAT TTAA
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Protein sequence | MKQVAFRWID KYLISVKLHE NFLVLFFTAV LAVVVMGICF ADAASSQRTI EAQKQVDVIA QLASATQISA SDLAPLLQNT AINIGLNTDI SAQVSGQDYS LSYVDDTNFL TGLGLWHITA ISLSLLLMFV CSYYVNTFIG GSLFDIYGAL KRLAEGDLAS RIGYAPARNE FNLIARTVDR VTEREHLLVK TTQEAVALIQ QISAQLRVRS DENTQLASVQ QDRIDSLASA TEEMAVSIRE VASHAQESST QISRATEKTT QGQAQIKKTL VEINQLAGEV RGTSVAVAEL DSSATEIGEV IATINAISDQ TNLLALNAAI EAARAGEQGR GFSVVADEVR TLAGRTQAAT VEIQKIIETL QTNSRGVMNV MAKTVKEAES SEQLMTSASQ NISEIAEQNQ HISDRSLEIA AAAEEQGAVA DNIASDVDSV RSSSIQVMEL VNMTAKEIES LSRQADVLEG LMKDLII
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