Gene Sfri_3834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3834 
SymbolfolE 
ID4280725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp4573438 
End bp4574088 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content44% 
IMG OID638136655 
ProductGTP cyclohydrolase I 
Protein accessionYP_752498 
Protein GI114564984 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0302] GTP cyclohydrolase I 
TIGRFAM ID[TIGR00063] GTP cyclohydrolase I 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACTCA GTGAAGCCGC AATAAAAGTA CAAGCAGCGC TAAAAGACCG TGGGTTAGAA 
ACCCCAATGC TGCCAAAAAC TTCCACGCCT GAAGAACGTA AAGTCAAAAT TGAACACCAT 
ATGCGTGAAA TCTTGACCTT AATGTCACTC GACCTAACCG ACGACAGCTT AGTTGATACT 
CCTCGTCGTA TCGCAAAAAT GTATGTCGAC GAAATATTCT CTGGGCTTGA TTACGAAAAC 
TTCCCTAAGA TCACGGTTAT CGAAAACAAA ATGGGTGTTG ATGAAATGGT GCGTGTACAA 
GACATCAGTC TTACCAGCAC CTGCGAACAC CATTTAGTGA CCATAGATGG CTTCGCAACG 
GTGGCCTATT TGCCACGCAC AAAAATTATT GGCTTGTCTA AAATCAATCG TATCGTGCGC 
TTCTTTTCCC AACGCCCACA AGTACAAGAG CGCCTAACCC AACAAGTGTT AGTGGCACTG 
CAAACTCTAC TTGAAACTAA AGACGTTGCG GTAAAAATGG ATGCGGTACA TTACTGTGTT 
AAATCTCGTG GTGTAATGGA CTCAACCAGC TCAACTACCA CTACAGCGCT TGGTGGTATT 
TTTAAATCAA ACCCAGCTAC CCGCGCCGAG TTTTTACACC AAGTAAAATA G
 
Protein sequence
MALSEAAIKV QAALKDRGLE TPMLPKTSTP EERKVKIEHH MREILTLMSL DLTDDSLVDT 
PRRIAKMYVD EIFSGLDYEN FPKITVIENK MGVDEMVRVQ DISLTSTCEH HLVTIDGFAT 
VAYLPRTKII GLSKINRIVR FFSQRPQVQE RLTQQVLVAL QTLLETKDVA VKMDAVHYCV 
KSRGVMDSTS STTTTALGGI FKSNPATRAE FLHQVK