| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3685 |
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| Symbol | |
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| ID | 4280578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4370935 |
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| End bp | 4372944 |
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| Gene Length | 2010 bp |
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| Protein Length | 669 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638136498 |
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| Product | outer membrane protein |
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| Protein accession | YP_752351 |
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| Protein GI | 114564837 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03509] decaheme-associated outer membrane protein, MtrB/PioB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATTTA AATTGAATCT GATCACCATA TCCATGATAG CCATGTCATC ACCTGTTATG
GCTGCTAATT TTGCAGTTGG TAACGCAAAC ATGGATTCGG TGAATACAAA AAATTATGAG
TGTAATCGTT GTATAAGTTC TACGGGGTAC CAAGGTGAGG TAACGCTTGC TGCGGGTTAT
AACGACATTA ATGATATTCA TGCGGCTAAT GCCTTAGGTA CTGACAATAA CGGCGGTATT
GCGGCAGTGA GTGGAAATAT CAAATACCAA GGTGAGTCAG GCTATGAAGC GAAGATTCAA
GCTTATCAGT TAGGTATGGA TAATGGTTTT GCTCATCTAT CTGGCGGTCA AGCTGGCTTG
TATGAATTTA ACTTAGATAT TGATTCTATC AAAACCTATC AAGCTGGCGA TGTTCAAAGT
TCGCTTTGGC ACAACAACGG TATGTTGACG CCTAGTGACA GTCTTAATGA ATTTGACCTA
AATCAACAAC GTGAAAAAGT CGGTTTAGGG TTTGAATTTG ATCAAGATTT CTATGGTGTA
TTTGTTAAAT ATAGCCAAGA AGATAAAACG GGTTACAAGT CTAGTAGTCT CGTATCACCC
AGCCCAATAA ATTTTGGTTT ACCGACAGAT TCTACCACTC AACAATTGGA TGCTGGTATC
CACTTGTCGG GTGATAACTG GTTAACTGAA CTGAGTTACT TTGGCAGCTA TTATGAAAAC
AACATCGACA ATCTAAGTCT TCCATACGTT AATGACATGT ATTCGGCGAC ACCAGATAAT
CAAGCTCATC AAGTGTCGTT ATCAGGTCAA TATCAGCTCC ACCGCACTGT GATGAATGGA
CGTATTGTCG CAGGACGTAT GATCCAAGAT GAAGATCTTA TCCAAATGGC GGGTAATCCA
CTGCAAAATT GGGACGGTCA AATAGATACG CTAGACGGTC GTTTCGCTCT GACCTCAATG
ATAACTAATC GATTACGTTT AGGTGGCAGT ATTGATTACA CCAAGCGAGA TAATCAAAGC
TCTACCGCCG AGTTTGCTCA ATATAACTTT AATAGTTTAA CCGGCGCTTT TAGACAAAAT
ACCCCTCGTG ATTTGGAACG TAATACTTAT AAAGTTAACG CAAGCTATCG CATCGCCAGC
GGTTATCGCT TGCAAGCTGG TTATGATCGC AAAGACGTTG ATCGTACTTT TAGTGACAGA
GAACAAACCA ATGACGATAA CTTATGGATG AAGTTCAATG TTCGCGCATT AGATAACGTT
AACGTTAATC TTAAAGTTGA GCATGCCAAT CGCAGTGGAT CTGAGTATGA AGCAAGCGAC
CTAACCTCAT CTGAAAGCAA CAGTTTATTG CGTAAATACT ACTTAGCAGA TCGTGACCGC
AATGCACTCG AATTCAAGAT TGTGCATAAC CCAACTGATT GGATGAATCT GGGTATCACA
ACTCGTTATG CCAAAGACGA ATATGACGAT ACTAAAATTG GATTAACTGA ATCAGAAGAT
TACGGATATG ACGTTAATGT AAATATTCAA TTTAATCAGT ATATAGATGG TTATGTGTTT
GGGAGTCAGC AATGGATTAA CTCTAATCAA GCAGGCAGTC AAAGCTTTAG TTCATCTGAT
TGGCAAGACG ATATTGAAGA TGAATTTATC AATATAGGTA CGGGTTTAAG CTACAGCGGT
TTAATGCAAG ACCGTCTGAT AGTAGGGATC GATTATCTAT TCAGTAATTC CATTAGTGAC
ACCCTAGTTC ACAGTTACAT TGGCTCTACA GATACGCGTA GCACTTACGG CGATTATTAT
TCATATAGTC ACAGTGCCAG CATGTATGCA GATTATGCCC TAAGTGAGCA AATGGCACTT
AAATTAACTT ACCGCTATGA ACGCTATTTC GATACTGATG CAGCCAACGT AGGGGTCAAT
GATATTGCAG GGATGATTAC CTTGGGTGAT ATCAATCATA ACTACAACGC ACACCAGGTG
ATGTTGGCGT TTACCTACAA ATTGCGCTAA
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| Protein sequence | MSFKLNLITI SMIAMSSPVM AANFAVGNAN MDSVNTKNYE CNRCISSTGY QGEVTLAAGY
NDINDIHAAN ALGTDNNGGI AAVSGNIKYQ GESGYEAKIQ AYQLGMDNGF AHLSGGQAGL
YEFNLDIDSI KTYQAGDVQS SLWHNNGMLT PSDSLNEFDL NQQREKVGLG FEFDQDFYGV
FVKYSQEDKT GYKSSSLVSP SPINFGLPTD STTQQLDAGI HLSGDNWLTE LSYFGSYYEN
NIDNLSLPYV NDMYSATPDN QAHQVSLSGQ YQLHRTVMNG RIVAGRMIQD EDLIQMAGNP
LQNWDGQIDT LDGRFALTSM ITNRLRLGGS IDYTKRDNQS STAEFAQYNF NSLTGAFRQN
TPRDLERNTY KVNASYRIAS GYRLQAGYDR KDVDRTFSDR EQTNDDNLWM KFNVRALDNV
NVNLKVEHAN RSGSEYEASD LTSSESNSLL RKYYLADRDR NALEFKIVHN PTDWMNLGIT
TRYAKDEYDD TKIGLTESED YGYDVNVNIQ FNQYIDGYVF GSQQWINSNQ AGSQSFSSSD
WQDDIEDEFI NIGTGLSYSG LMQDRLIVGI DYLFSNSISD TLVHSYIGST DTRSTYGDYY
SYSHSASMYA DYALSEQMAL KLTYRYERYF DTDAANVGVN DIAGMITLGD INHNYNAHQV
MLAFTYKLR
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