Gene Sfri_3611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3611 
Symbol 
ID4280504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp4288242 
End bp4288931 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content44% 
IMG OID638136423 
Producthypothetical protein 
Protein accessionYP_752277 
Protein GI114564763 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.00237944 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACCA AACTTAATGC GATCGCATCA GCCCTATTTT TATTACTCGC TCCAGCAGCA 
ATGGCCGCCA ATGTTGCTGT TATCACCTTA GAAAATGGTG CCAATGTTCG TCTAAAAGAC 
GACTTCACTT GGGAATACAT CATTACCGAA ACAGTAACCC AACCAGTGCA AGCTGCTAAA 
GCAGACATCA CAGAGCAAGC AAACGGAGTA ACACCGCCTG CAATTGCACC TGCAGCGTCG 
GTAGCTGCAG CAACAACACC TGTTGCAGCA CAATCGGTTG CCATGCCTAC TGCGCCTGCA 
GTTAATTCTC AAGTAGCAAC CACACGCTTA ACTGCAGCGG CGTTAGCACA ACCAGAATTA 
TTAGGCAGTA CGGCTAAAGA CGGCATTAAA ATCACCCTTG CAGACACAAA ATGGAAAGGC 
GATAAGCTCG GCTTAGTGTT CGATTTTGAC AGCACCAGTA ACGAACATGT CACAGTTGTT 
GAAGTTGAAG TGAGTTTTTA CAATGACAAC GGTGCATTGC TCAAAACAGA AAAGCTTGAA 
GCCTGGGAAG CTATATTCCG TATGCCAGAA ACTTACCTGC GTAAAGGTCA GCATCGCCAA 
AGTGATACAA TTTGGGTAGA AGGTGTTAAT AAGCAGCAAT GGCAAAAGCA GTTAATCAGC 
TTAAAAATTA TTGAAATTGA ATCACGTTAG
 
Protein sequence
MKTKLNAIAS ALFLLLAPAA MAANVAVITL ENGANVRLKD DFTWEYIITE TVTQPVQAAK 
ADITEQANGV TPPAIAPAAS VAAATTPVAA QSVAMPTAPA VNSQVATTRL TAAALAQPEL 
LGSTAKDGIK ITLADTKWKG DKLGLVFDFD STSNEHVTVV EVEVSFYNDN GALLKTEKLE 
AWEAIFRMPE TYLRKGQHRQ SDTIWVEGVN KQQWQKQLIS LKIIEIESR