| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3587 |
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| Symbol | |
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| ID | 4280480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4263581 |
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| End bp | 4264540 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638136399 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_752253 |
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| Protein GI | 114564739 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCACAGT TAAGTGCGAC CGCGTTTAAT TTACAGGCCG TTGCCACCGC TCAGCTGGTT
GTAGATAAAG ACAAAACTAT CACCATAGCG CCGCAATTAG ATATGCAGGT GCTTAAGCGC
CATGTGGTGC CAGGGCAACA GGTGCAAAAA GGCCAACCAT TATTGACTAT CGGCGGGGCA
GATATTGCTG CGGCGCAAGC CGATTACGTT AATGCTGCAA CGGAGTGGGA TCGTATAAAG
CGCATGAGCC AAGGAACGAT TAGTGCCAGC CAGCGTATGC AAACCGAAGT CAATGCAGAG
CTTAAACGTG CCATTTTACA GTCGGTAATG ATGTCCACAA AACAGATAGC CGAGCTAGCA
ACATCGCCAA GTTCAATTGG CCAGTTTCAG TTATTGGCTC CCATAAATGG GCGGGTTCAG
CAAGATATTG CCACAGTAGG ACAAGTGCTA ACCGCGGGCA CACCTTTGAT GCAACTGACT
GATGAATCGT ATTTGTGGGT GGAGGCTGAA CTGACGCCAT TACAAGCAGA TCAAGTCAAT
ATGGGCACCG ATGTTTTGGT GCGAGTGGGA AGCCGTACTC GAGAGGGTGT CATTATTGGA
CGTTCGCATG AAATTAACTC GCAAACCCGC ACTGAGCAAG TATTAGTGCG TATGGCAAAC
CCTGGCCATG ACTTACATGC TGGTGAGTTT GCCGAATTAT ACCTAGCAGC AAATCAAGGG
GCAGAGCCGC TTGGGTTTAT TGTGCCAGAT GCTGCGTTAA CACGCAGTGG TGATGGTGAT
TGGCAGGTGT TCATAGAACA AGACGGTGGA TTTAGTGCAG TAGAAGTTTC TGTGGTAGAG
CGTCAACGTG GACTGAGTTT TATTCGTGGT TTAGTACCAC AAACTCGCGT TGTTGTATCT
GGTGCTTTTT TCTTAGCATC TGAGCAAGCA AAATCTGGCT TTGATATCCA TAACCACTAA
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| Protein sequence | MAQLSATAFN LQAVATAQLV VDKDKTITIA PQLDMQVLKR HVVPGQQVQK GQPLLTIGGA
DIAAAQADYV NAATEWDRIK RMSQGTISAS QRMQTEVNAE LKRAILQSVM MSTKQIAELA
TSPSSIGQFQ LLAPINGRVQ QDIATVGQVL TAGTPLMQLT DESYLWVEAE LTPLQADQVN
MGTDVLVRVG SRTREGVIIG RSHEINSQTR TEQVLVRMAN PGHDLHAGEF AELYLAANQG
AEPLGFIVPD AALTRSGDGD WQVFIEQDGG FSAVEVSVVE RQRGLSFIRG LVPQTRVVVS
GAFFLASEQA KSGFDIHNH
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