Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3561 |
Symbol | |
ID | 4280454 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 4230824 |
End bp | 4231747 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638136373 |
Product | putative manganese-dependent inorganic pyrophosphatase |
Protein accession | YP_752227 |
Protein GI | 114564713 |
COG category | [C] Energy production and conversion |
COG ID | [COG1227] Inorganic pyrophosphatase/exopolyphosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAATGT ATGTAGTGGG TCACAAGATC CCTGATTCAG ATTCAATTTG TGGTGCTATA GCATTAGCAT ATTTAAAAAA CCAAATCGAT GAACCGGCAA TTGCAGCCCG TTTAGGCGAG TTATCACCAG AAACCGCATT TATTTTAGAA AAATTTGGGT TTGAAGCACC AGAATACAAA ACCAGTTACG CTGGTGAAGA AGTCTATATT GTTGACCATT CAGAAATTAC TCAAGCACCA GATGATATCG CTCAAGCGAC TATCGTCGGT ATTGTCGACC ATCACAAATT AGGCGACCTA ACCACTTCTA CTCCGCTAGA ATGTTGGATC CGTCCAGTTG GTTGCAGCAA CACCGTCATC AAAATGATGT ACGATTTCTA CCAAGTAGAA ATTCCAGCAA ACATCGCTGG TATCATGATG TGCGCCATTT TAAGTGACAC CGTTATTTTC AAATCGCCAA CCTGTACCAC TGCCGATATC CGTTGCGTTG AAGCGTTAGC TAAAATCGCC GGTATAAAAG ACTTTAAAGA ACTCGGCATG GATATGTTTA AAGTGAAATC AGCAGTTGAA GGCACACCAG CACGTGACCT TGTTATGCGT GACTTTAAAG ACTTCAACAT GAACGGTAAC CTAGTGGGTA TTGGCCAATT AGAAGTTATC GATTTGTCTG TATTTGACGA TATCAAAGCT GACTTAGAAG CTGATATTGC TAAATTGAAA GTTGAAGGCA ATCGTCACAG CGTATTATTG CTGCTAACCG ATATCATGAA AGAAGGTTCA GAAATGTTAG TTGTTTCTGA TTCAGCAGAC TTAACTGAGC GCGCTTACGG TAAACCTACC GTTGATGGCC GCGTGTGGTT AGACGGCGTA TTAAGCCGTA AGAAACAAGT TGTACCTGCA CTGCAAGATG CATTTGCAAA GTAA
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Protein sequence | MAMYVVGHKI PDSDSICGAI ALAYLKNQID EPAIAARLGE LSPETAFILE KFGFEAPEYK TSYAGEEVYI VDHSEITQAP DDIAQATIVG IVDHHKLGDL TTSTPLECWI RPVGCSNTVI KMMYDFYQVE IPANIAGIMM CAILSDTVIF KSPTCTTADI RCVEALAKIA GIKDFKELGM DMFKVKSAVE GTPARDLVMR DFKDFNMNGN LVGIGQLEVI DLSVFDDIKA DLEADIAKLK VEGNRHSVLL LLTDIMKEGS EMLVVSDSAD LTERAYGKPT VDGRVWLDGV LSRKKQVVPA LQDAFAK
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