| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3453 |
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| Symbol | |
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| ID | 4280350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 4105158 |
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| End bp | 4106414 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638136269 |
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| Product | DNA-directed DNA polymerase |
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| Protein accession | YP_752123 |
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| Protein GI | 114564609 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00650413 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGCTC TAGTTGACGC GAATAGCTTC TATTGCAGTG CAGAACAAGT CTTTCGCCCT
GATTGGCGTG GTAAGCCTGT TATTGTGTTG AGTAACAACG ATGGGATGAT TGTTGCTGCT
AATCGTCAAG CTAAAGAGGC TGGAATTGGG AAGTTTCTAC CTTACTTTCA AGTTAAAGCC
TTATGCGCCA AACGTGGTGT TATTGTCTGT TCCTCAAACT ATGAACTTTA TGCTGACTTA
TCTAGCAAAA TGATGGATAT CATTGGCCGC TTTGCCCCTG AGCAACATGT CTACTCTATT
GATGAAAGCT TCCTCTCTTT TAAAAACTGC TATCCCGCTA TCAAATGCCT CCTTACGCAA
GGCCAGTTAA TCCGCCGTGC TGTGTGGAAA GAAGCGCGGC TAGCAGTCTG TGTGGGTATT
GGTGAAACGC TTACTCTTTC TAAAATAGCC AACCATGCAG CTAAGAAGAT TGAGGGCTAC
AAAGGAGTTT GTTTCATTAG TAATGAGCAA GAGCGTATAG CTATTTTAAA GCAGCTTGCT
GTAGGGGATG TATGGGGGAT AGGCCGCCGA ATAAGTAAGA AGCTTGAATT AATGAATATC
CGTACTGCGT TTCAACTTGC GTCTATGCCG CCGACACTGG CAAGAAAGCA ATTTAGTATT
GAAATAGAAC GTACCGTTCG TGAGCTTAAC GGCCAAGCCT GTAAAATATG GGATGAGTCG
AGGGCAGATA AAAAGCAGAT ATTTTCGACT AGAAGCGTAG GTGAGCGCAT CACAGATTAT
TCGTCGTTAT TACAAGCATT GAGTAAGCAT GTTGCTATCG CAGCGAGTAA AGCACGTAAG
CAAGGTTCAA ACTGCAAGAC CTTGCTGATT TTTGCCAGTA ATTCACCCCA TGATGAACGG
CCTGTAAGCT ATAAAGCTAT TGTACATTTT CCATGTCCAA CCAACTGCAC TGTTGAGCTA
ACCAAAGCTA TGAGTGAGGC CGCACCAAAG CTATTTCGTG AGTTCGTACA TTATTACAAA
ATCGGTATAG GGCTTATCGA TTTAGCTAGC GAAAAACATA ACCAATTCGA TTTATTTAAC
CCTTCAAAGG CTAATCCCGC TTTGATGAAT ACGCTAGATG ACATTAACCA ACGCTATGGC
AGTGATACGA TGTTTCTAGC AGCTCAAGGC ATAGAGCACA AGTGGTCAAT GCGCCGTGAT
TTGCTAACGC CACAATACAC AACCAAATGG TTCAGTGTAC CCAGCATTAA GTGCTAA
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| Protein sequence | MFALVDANSF YCSAEQVFRP DWRGKPVIVL SNNDGMIVAA NRQAKEAGIG KFLPYFQVKA
LCAKRGVIVC SSNYELYADL SSKMMDIIGR FAPEQHVYSI DESFLSFKNC YPAIKCLLTQ
GQLIRRAVWK EARLAVCVGI GETLTLSKIA NHAAKKIEGY KGVCFISNEQ ERIAILKQLA
VGDVWGIGRR ISKKLELMNI RTAFQLASMP PTLARKQFSI EIERTVRELN GQACKIWDES
RADKKQIFST RSVGERITDY SSLLQALSKH VAIAASKARK QGSNCKTLLI FASNSPHDER
PVSYKAIVHF PCPTNCTVEL TKAMSEAAPK LFREFVHYYK IGIGLIDLAS EKHNQFDLFN
PSKANPALMN TLDDINQRYG SDTMFLAAQG IEHKWSMRRD LLTPQYTTKW FSVPSIKC
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