| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3398 |
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| Symbol | |
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| ID | 4280300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 4047278 |
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| End bp | 4048156 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638136219 |
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| Product | transcriptional regulator, LysR family protein |
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| Protein accession | YP_752073 |
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| Protein GI | 114564559 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAATATCA AAGATTTAGA GCTATTCATT GCTGTAGCAA AGTTAGGCAG TTTTTCGAAA
GCTGCAAAAT CTTTTGATAC TCGCAGAGCA TTAGTCAGTC GCCGTATTGG AGAAATAGAA
AAACAGCTCG GGGCACCATT ATTTACTCGC ACAACTAGAG TCATGGCCTT AACCTCTGCC
GGTCGACAAT ATCTTGCTCA AATCGAACCA CTGGTGAATC AATTAAATCA TGCCGGATAT
GTGTTTAAAC ATCGCCATGA TGAAGTACAA GGTAATTTAC GCATTGGTTT ATTGCCTTTC
GTCGACAAGT TGATGGATGA ATATATTGCT CACTTCATTC ATGCGTATCC GCAAGTCCAA
TTAGAGGTGT TAATTGTGTC TGGTGGCAGT AAAGAGCTCA ATCGTTTAGG GCTCGACTTG
ATTATTGATG TAGGTGAAGT TAACGGCGCC AACATTGCTG TACACAAACT GACGACTTTT
GAGCGTAAAA TTTATGCTAG CCCCAGTTAC CTAGAAAAGT CATCACTGAT CGAAAATACC
GATGACTTAC AATATCATTC ATTACTAGGT TTTAGAGATG CACATGGGCA ACTAGAGCAG
ACCTGGCATT TTCAGCACGC AAACGTACCA ACACATTATA AAGTTATCTG CAGCGACTTT
AACTCGTTAT ATCACTTATG TTTAGCTGGG GCGGGTATCG CTTTATTACC TCATGTTATT
GCTCACGAGG CGGTAAATCA GGGACGATTA ATCAATGTTC TGCCGCAACA CAGCATTGGC
TTTGCCGACA TCAGCTTGGC CTATTCTACC AAAAGTCCTC AATCGCCTGT AGCAAAGGCC
TTTTGCGAAC ACTTACTTCG GGAGATGGTT CCCTGTTAA
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| Protein sequence | MNIKDLELFI AVAKLGSFSK AAKSFDTRRA LVSRRIGEIE KQLGAPLFTR TTRVMALTSA
GRQYLAQIEP LVNQLNHAGY VFKHRHDEVQ GNLRIGLLPF VDKLMDEYIA HFIHAYPQVQ
LEVLIVSGGS KELNRLGLDL IIDVGEVNGA NIAVHKLTTF ERKIYASPSY LEKSSLIENT
DDLQYHSLLG FRDAHGQLEQ TWHFQHANVP THYKVICSDF NSLYHLCLAG AGIALLPHVI
AHEAVNQGRL INVLPQHSIG FADISLAYST KSPQSPVAKA FCEHLLREMV PC
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