Gene Sfri_3394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3394 
Symbol 
ID4280296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp4041636 
End bp4042661 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content43% 
IMG OID638136215 
Producthypothetical protein 
Protein accessionYP_752069 
Protein GI114564555 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGCCA CGGTAAAGTA TCGGTTAGCC TTTTTAGCCT TAATGGTGTT GAGCTTTGTG 
ATAGGCGTTC AGTGGACACC AGAGTCGTTA ACAAGCGACG CTGACAAGTG GTCGTTATAC
CTTATTTGTG TATTGTATTT TGTGTTACTG CCACTGAGCT ACTGGTATTG CATTATTAAA
ATGGGTGGTC AGAAACTGTG GAAATTGATA GTTATTTTCA GTTTAAGCAG CTTAGTTGCT
CGGTTAAGTT TTCCTGCCGA AGTCGCGCAC TATTTTGAGT TTATTGCTTG GTTACGCTAT
CCGATTATTG CGGTGCTGTT GGTCATTGAA TTGTATTTGG TGGTGAGTGT TGTTCGTGGC
TTGATTAAGG TGCGAAAGCT TAAGGGCGAT CCTAGAGTCG GGGCGGTAGA AACGTATCGA
GATGGCGATG AAAAAAGCTT AACTATCGCA CTTATCATGG CCAGTGAGGC GACTAACTGG
TTTTATTCAA TCCCTTGGTT TTCACGTCAT CATCCGGCGG CCATCGCCAA TATTAACCTC
ATTAGTGCAA CGCGCTGGCA TGTGTGGCTT ATGCTAATGG GTTGCATCGC TGCATCTTGT
GGCAGTTATT TATTACTGGT TTCATGGAGC GAGTGGGTGG CGATAATTGT CTCGAGCATT
ATTGCCTATA CCTTAATGTC TATCGTGGCT AACCATCGGC TATCACGTTA TTATTCTTTG
TATTTAATCA GAGATAACTT AGTGATCAAT AATTCATTAT GGGGATTTAT GGTAGTGAAC
ATTGCCGATA TTGCCGATAT TGCTAGTGCC GCTGATCAAC AATCAACTGA ATTAAATAAA
GATGAGCCAG AAACCATTAT GATTGGCCGT GGGCAGAGTA ATGTCACTAT CACCCTAAAC
CGTCCGGTTA TTTATCATGG TGGTATGGGC CAGTTACCCG AACCCATGAA AACGGTGCAT
TTGAGTGTGG ACAATCCACA GCAGTTAATT CAGGCGCTTA ATAACAAAGT CTCTGTGGCA
GTGTAA
 
Protein sequence
MRATVKYRLA FLALMVLSFV IGVQWTPESL TSDADKWSLY LICVLYFVLL PLSYWYCIIK 
MGGQKLWKLI VIFSLSSLVA RLSFPAEVAH YFEFIAWLRY PIIAVLLVIE LYLVVSVVRG
LIKVRKLKGD PRVGAVETYR DGDEKSLTIA LIMASEATNW FYSIPWFSRH HPAAIANINL
ISATRWHVWL MLMGCIAASC GSYLLLVSWS EWVAIIVSSI IAYTLMSIVA NHRLSRYYSL
YLIRDNLVIN NSLWGFMVVN IADIADIASA ADQQSTELNK DEPETIMIGR GQSNVTITLN
RPVIYHGGMG QLPEPMKTVH LSVDNPQQLI QALNNKVSVA V