| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3389 |
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| Symbol | |
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| ID | 4280291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 4037113 |
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| End bp | 4038594 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638136210 |
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| Product | UbiD family decarboxylase |
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| Protein accession | YP_752064 |
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| Protein GI | 114564550 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
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| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTTA AAGATTTACG CAGCTTCATC GATCATTTGG AAAAAAATGG CGAGTTAAAG
CGCATTAGCT ACCCTGTTGA CCCTCATTTA GAAATGACAG AGATCGCCGA TCGTGTTTTA
CGATCTGGAG GCCCCGCACT GTTATTTGAA AATCCGACCA ATCATACAAT GCCAGTACTG
GTTAACTTAT TTGGTACGCC TAAACGTGTT GCTATGGCAT TGGGTAAAGA CGATCCTTTG
GCTTTGCGAG AAGTCGGTGA GTTATTAGCA TTTTTAAAAG AACCCGAGCC ACCTACAGGC
TTTAAAGATG CCATCGCCAA AATCCCCATG TATAAGCAAG CATTAAATAT GCCGCCTAAA
ACAGTGCGTA ATCCGCCTTG TCAGCAAGTG GTAAAAACTG GTGATGAAGT CGACTTAACC
TCGTTGCCAA TCCAACATTG CTGGCCTGGA GATGTCGCCC CATTAGTGAC TTGGGGACTC
ACTATCACCA AAGGGCCGCG TCAGAAAAGA CAAAATTTAG GTATTTATCG TCAACAGTTA
TTAAGTAAAA ACAAGCTGAT TATGCGCTGG CTTGATCATC GTGGCGGCGC TTTAGATTTT
AAAGACTTTA AACAGCTCCA TCCTGGAGAG CGTTATCCTG TCGTAGTGGC ATTAGGTAGC
GATCCAGTGA CCATTTTAGG TGCTGTCACT CCTGTGCCAG ACTCCATGAG TGAATATGCC
TTTGCAGGTT TACTGCGCGG CGAACGAACT GAAGTCTGTA AAGCCATTAG CTGCGATCTT
GAAGTGCCAG CCACCAGCGA GATTATTCTT GAAGGTTATA TTGACCCTGA AGAGACAGCA
GTAGAAGGTC CATACGGCGA TCATACTGGC TACTATAACG AAACCGACTC ATTCCCAGTA
TTTACCGTGA CTCACATTAC TCACCGTAAA GATGCCATTT ACCATAGTAC CTATACCGGG
CGTCCACCTG ATGAACCGGC CATGTTAGGC GTGGCATTGA ACGAAGTATT TGTACCTATT
TTACGTAAGC AGTATCCAGA AATTATTGAT TTTTACCTGC CGCCTGAAGG TTGTTCATAC
CGCATGGCTG TGATTTCAAT CCGTAAGCAA TATCCCGGCC ATGCTAAGCG TGTCATGATG
GGGGCGTGGT CGTTCTTGCG CCAGTTTATG TATACCAAAT TTATCGTTGT CGTTGATGAC
GATGTCAATT GCCGTGATTG GCAAGATGTT ATTTGGGCTA TTACTACACG AATGGATCCT
ATTCGCGATA CCATGATGGT AGATAATACT CCGATTGATT ATCTTGATTT TGCCTCACCC
GTTGCCGGTT TAGGATCTAA GATGGGTTTA GATGCCACTA ACAAATGGCC TGGTGAAACC
ACGCGAGAAT GGGGAACCCC TATCGTGATG GATGAAAAGA CAAAACAGAG AATTGACCAA
ATTTGGGATG ATCTCGGCAT ACAGGATATG CCAACATTGT AA
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| Protein sequence | MSFKDLRSFI DHLEKNGELK RISYPVDPHL EMTEIADRVL RSGGPALLFE NPTNHTMPVL
VNLFGTPKRV AMALGKDDPL ALREVGELLA FLKEPEPPTG FKDAIAKIPM YKQALNMPPK
TVRNPPCQQV VKTGDEVDLT SLPIQHCWPG DVAPLVTWGL TITKGPRQKR QNLGIYRQQL
LSKNKLIMRW LDHRGGALDF KDFKQLHPGE RYPVVVALGS DPVTILGAVT PVPDSMSEYA
FAGLLRGERT EVCKAISCDL EVPATSEIIL EGYIDPEETA VEGPYGDHTG YYNETDSFPV
FTVTHITHRK DAIYHSTYTG RPPDEPAMLG VALNEVFVPI LRKQYPEIID FYLPPEGCSY
RMAVISIRKQ YPGHAKRVMM GAWSFLRQFM YTKFIVVVDD DVNCRDWQDV IWAITTRMDP
IRDTMMVDNT PIDYLDFASP VAGLGSKMGL DATNKWPGET TREWGTPIVM DEKTKQRIDQ
IWDDLGIQDM PTL
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