| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3311 |
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| Symbol | |
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| ID | 4280213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3956912 |
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| End bp | 3957169 |
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| Gene Length | 258 bp |
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| Protein Length | 85 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638136129 |
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| Product | RNA chaperone Hfq |
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| Protein accession | YP_751986 |
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| Protein GI | 114564472 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1923] Uncharacterized host factor I protein |
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| TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.486536 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTAAGG GGCAATCTTT ACAAGACCCA TTTTTGAACG CATTGCGTCG AGAGCGTGTA
CCAGTCTCTA TCTATTTAGT GAATGGTATT AAATTACAAG GCCAAGTTGA GTCATTTGAT
CAATTTGTTA TCTTGTTGAA AAATACTGTA AGCCAAATGG TTTACAAACA CGCTATTTCA
ACAGTTGTAC CAGCACGCCC ATTTAATGTT TCTGCTCACC AGGGTACTGC CCATGGTGAA
GAAAGCGATG CTGAATAA
|
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| Protein sequence | MAKGQSLQDP FLNALRRERV PVSIYLVNGI KLQGQVESFD QFVILLKNTV SQMVYKHAIS
TVVPARPFNV SAHQGTAHGE ESDAE
|
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