| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3277 |
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| Symbol | |
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| ID | 4280179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3921921 |
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| End bp | 3922802 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638136095 |
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| Product | glutamate--tRNA ligase |
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| Protein accession | YP_751952 |
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| Protein GI | 114564438 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000051469 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTCCCC CATCCTATAT CGGACGTTTT GCGCCCTCAC CATCAGGTTC ACTGCATTTT
GGCTCACTCG TTGCAGCATT AGGCAGTTAT CTTCGCGCGC ACAGTCAGCA AGGCCAATGG
CTTGTCCGCA TAGAAGATAT CGACCCGCCA CGCGAAGTCC CCGGTGCAAG CGATAATATC
CTTAGAACAC TCGATGCCTA CGGCTTACAT TGGCATGGAA CCGTACTATT TCAACAGCAA
CGATATCAAG TTTATCAAGA CCAAATTGAA GCGTTTATCG CCAGTGATCT TGCTTATTAT
TGCCAATGCA CACGTAAAAT AATCCAAACC AGTGGCGGCG TGTATGACGG CCGTTGTGGC
CGACTTCAGC CTAGACTGAC ACACGGTGCA ATTCGAATTC GTAATCACGT TAAAGTTGAT
CATTTTGTTG ATAAACTTCA AGGCCCGGTG GTGGTTGATA AAGCTTTCGC CGAAGAAGAC
TTTATTATTA AACGCAGTGA TGGTTTGTAT GCTTACCAAC TCGCCGTTGT ACTCGACGAT
GCGTATCAAG GCATAACTGA AGTGGTCAGA GGTTGTGATT TACTTGAAGC CAGTTGCCGG
CAAATTAGTT TGTTTACCCA ATTGGAATTT ACGCCACCTG ATTGGCTACA TTTACCGTTA
GTTTGTGCCG AGAAAGGCTT TAAATTATCC AAGCAAAATT ATGCTCCAGC TATCGATGTT
ATTCACCCTC AAGCCAGTAT TAATGCCGCG CTTACCTTTT TAGGCCAAAA AGCTGTCGAT
GTAGATTCAG TAGAGGTGAT GCTAAAGCAG GCTGTTGAAC AATTTGACCT AAGCACGATT
CCAGCACAAA AAGAAATTGT CTTATCGACA ATAAACGACT AG
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| Protein sequence | MIPPSYIGRF APSPSGSLHF GSLVAALGSY LRAHSQQGQW LVRIEDIDPP REVPGASDNI
LRTLDAYGLH WHGTVLFQQQ RYQVYQDQIE AFIASDLAYY CQCTRKIIQT SGGVYDGRCG
RLQPRLTHGA IRIRNHVKVD HFVDKLQGPV VVDKAFAEED FIIKRSDGLY AYQLAVVLDD
AYQGITEVVR GCDLLEASCR QISLFTQLEF TPPDWLHLPL VCAEKGFKLS KQNYAPAIDV
IHPQASINAA LTFLGQKAVD VDSVEVMLKQ AVEQFDLSTI PAQKEIVLST IND
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