Gene Sfri_3266 details

Gene Information

• Locus tag: Sfri_3266
• ID: 4280168
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: +
• Start bp: 3908061
• End bp: 3908750
• Gene Length: 690 bp
• Protein Length: 229 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 638136084
• Product: phage shock protein A, PspA
• Protein accession: YP_751941
• Protein GI: 114564427
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.942546
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGCATTC TAAACAAGAT TCTTACAGCG TTTCGTGGTG GTGCAACTGA AGTTGGCCAA 
AATATCGTTG ACGCAAACTC AACCCGAATT TTTGAACAAG AAATTCGTGA TGCAGAAAAA 
CATTTAACCC GCGCTAAACG TGAACTAACT GACGTGATGG CCAAAGAAAT GCAGGCCAGC 
CGCGAAATTG ATCGCCTAAA GCGTAGCGTT GTTGAGCACG AAGGTTATGT AACCCAAGCG 
TTAGATAAAG GTAATGAAGC TTTAGCGATT GAAATTGCTG AAAAGATTGC TCAGCTAGAC 
GAAGAATTAG CTGAACAACA AACTGCCAAT GACAGCTTTA GCTCACATGC AGTGCGTTTA 
AAAGATTTAG TGAAGAAGAC TGAGCGTCAA TTAAATGATT ATCAACGTCA ACTTACTATG 
GTTAAAACCA CTGAAAGCGT GCAAAAAGCC ACTGCGACTA TCACAGACTC ATTTGCATCA 
AGCAATTCAA AACTGCTTAA CGCTAAAGAT TCACTAGAGC GCATTAAAGC ACGTCAACAG 
CAGTTTGATG ACCGCCTAAA AGCGTCAGAA ACATTAGCTG AAGAGAATAG CGATAAGTCA 
TTACATGCCA AGTTAGCTGA AGCAGGTATT GGCGAGCAAA AATCGAATGC TAATGCTGTG 
CTAGATCGCA TTAAAGCACG TAAAGGTTAA 

 

Protein sequence

MGILNKILTA FRGGATEVGQ NIVDANSTRI FEQEIRDAEK HLTRAKRELT DVMAKEMQAS 
REIDRLKRSV VEHEGYVTQA LDKGNEALAI EIAEKIAQLD EELAEQQTAN DSFSSHAVRL 
KDLVKKTERQ LNDYQRQLTM VKTTESVQKA TATITDSFAS SNSKLLNAKD SLERIKARQQ 
QFDDRLKASE TLAEENSDKS LHAKLAEAGI GEQKSNANAV LDRIKARKG