| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3175 |
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| Symbol | |
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| ID | 4280077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3802590 |
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| End bp | 3803378 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638135993 |
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| Product | ribonuclease H |
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| Protein accession | YP_751850 |
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| Protein GI | 114564336 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0328] Ribonuclease HI |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.983549 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAGA AGTTTTACGT AGTATGGGCC GGTCGAGAAA CGGGTATTTT TACCAGCTGG
GATGTTACCA AGCGTTCAGT TGATAAATAT CCGCAAGCCA AGTACAAATC CTTTGCTACA
GAAGCAGAAG CCAAAGTTGC ATTTGCTAAA TCTCCTGCAA GCAGCATAGG CAAAAGTGTG
CCAGCTAAAG CGGCTGGTCG TTCATCGACA AAGGCTGCAG GGGCTGGAAC ATCAACCAAG
ACTCTTAGCG CGAATCAAGC TGTGTTAAGC CAATTTGATG TGGTTATTTA CACCGACGGA
GGTTGCGAAC CCAACCCAGG TAAAGCGGGT TCAGGGATGG CGATATACCG CAAAGGCGAG
TTAGCCGAAT TATGGTTTGG TTTGTTTAAT CCTAATGGCA CCAATAATAC TGCCGAGCTC
AATGCGCTAC ATCAGGCACT CATTAAGGCA AAAAAAGTGC TTGATGCCGG TGAAACCGTG
CAAATTATGA GTGACTCACA GTATTCGATT AAATGTGTTT GTGAGTGGGC ATATGGTTGG
AAAGCTAAAA ACTGGACCCG AAAAACCGGT GAAATCGCCA ATCTGGAGAT CATCAAGCAA
GCACATGAGT TATACGATGC AATGAAAGAC GATTTAGTGC TTCAGCATGT CGCCGCCCAT
ATTGGTATTG AAGGTAACGA ATTGGCAGAC AGAATGTCGA TTCATGCGAT TGATCTGCAG
CACAAAGGGT TTAGTCAATT TACTGCGCCA CTGGATATCA GTAAAATTCT CGCGTTGCGA
ACAGGCTAG
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| Protein sequence | MAKKFYVVWA GRETGIFTSW DVTKRSVDKY PQAKYKSFAT EAEAKVAFAK SPASSIGKSV
PAKAAGRSST KAAGAGTSTK TLSANQAVLS QFDVVIYTDG GCEPNPGKAG SGMAIYRKGE
LAELWFGLFN PNGTNNTAEL NALHQALIKA KKVLDAGETV QIMSDSQYSI KCVCEWAYGW
KAKNWTRKTG EIANLEIIKQ AHELYDAMKD DLVLQHVAAH IGIEGNELAD RMSIHAIDLQ
HKGFSQFTAP LDISKILALR TG
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