Gene Sfri_3162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3162 
SymbolfolE 
ID4280064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp3786334 
End bp3787002 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content44% 
IMG OID638135980 
ProductGTP cyclohydrolase I 
Protein accessionYP_751837 
Protein GI114564323 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0302] GTP cyclohydrolase I 
TIGRFAM ID[TIGR00063] GTP cyclohydrolase I 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACCA TTAATGACAT AACTCGCGCA GAGTTGTCTG CAGAAGCATT AAAAGTACAA 
CAAGCGTTAG TCGCCCATGG CCTTGAAACA CCGTTAGTGC CAAGTGACAT GACCAGCGAG 
CAAAAATACC AGCGCATTAA AGGCTTAATG ACCGAAGTTG TGTCGACGCT AGGGCTAGAT 
TTAACCGATG ACAGCTTAGC CGAAACTCCG CACCGCATTG CCAAAATGTA CGTTAACGAA 
ATTTTCTCGG GTCTCGATTA TGCTAATTTT CCAAAAATCA CTCAAATCGA TAATAAGATG 
GGTGTTGAAG AGATGGTAAA AATTAGCAAT ATCAGTGTTG TGAGCACTTG CGAGCATCAT 
TTTATTACTA TCGATGGTTT CGCCAAAGTG GCATATATTC CCAAAGATAA CATTATCGGC 
TTATCGAAAA TTAACCGCAT CGTGCGATTT TTTGCTCAGC GTCCACAAGT GCAAGAGCGC 
TTAACTCAGC AGATTTTAGT CGCGCTGCAA ACGTTGTTGG CGACCGATGA TGTTGCAGTG 
AGCATTAACG CCATCCATTA CTGCGTAAAA TCTCGTGGCA TTATGGACAC CTCGTCAAGC 
ACACAAACCA CTGCACTTGG CGGCTGCTTT AAGGCCAATC CTGCTAGCCG AGCCGAGTTT 
TTAGCATAA
 
Protein sequence
MTTINDITRA ELSAEALKVQ QALVAHGLET PLVPSDMTSE QKYQRIKGLM TEVVSTLGLD 
LTDDSLAETP HRIAKMYVNE IFSGLDYANF PKITQIDNKM GVEEMVKISN ISVVSTCEHH 
FITIDGFAKV AYIPKDNIIG LSKINRIVRF FAQRPQVQER LTQQILVALQ TLLATDDVAV 
SINAIHYCVK SRGIMDTSSS TQTTALGGCF KANPASRAEF LA