| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3158 |
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| Symbol | |
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| ID | 4280060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3780786 |
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| End bp | 3782678 |
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| Gene Length | 1893 bp |
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| Protein Length | 630 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638135976 |
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| Product | hypothetical protein |
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| Protein accession | YP_751833 |
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| Protein GI | 114564319 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGTAAAT TAGAACAATT CCAACGATTT ATCCGTAATA ACGGTAAAGA CCTCACCGGT
GTCGATGTCC CTGTAATATT GAGTAACGAA CAAACAAAGC AACCTCAGCT TAAGTTTACT
TTTGGGTGGA CAATTGAAGT TGGGGTGAGT CAGCACGAAC ATGGATCTTA TTGTCCTAAT
GGCATCCAAT CTGGTAGTGC ATCAAATGCG AGGGATTACG CCCACGACAA AGCAAAAGAG
TATGCTAGCG GACAAAACTC GTTATTTAAT GACCGCTTTT TAAATATTCT TGGGCCTGAT
ATTGCTAGCA ATTTTTTGAT ACGAAATAGA GACTTAAAAT CTGCACCAGA AACCTATGTA
GGCAGCAAAG TGTGTTACAA CTGCAGTGGC TCTGGGTCAC AAAGCTGTTC TAATTGCCAT
GGCTCTGGCA AGAATTCTTG TACCGGTTGT AGTGGCAGCG GCCGCATTAG TGTGTCACGT
TTCGACAGCC ATAATAATCG CACTGTTTAT ACTACAGAAT CATGCTCATC TTGCTGGGGA
AGTGGTAAAA AAACCTGTTA TACCTGCAAC GGCTCAGGTT CAGTAACCTG CAATACTTGT
AATGGTGGTG GATATCTCTA TTACAGTTAC ACCATTGATG GTGATGCCAA ACGCAGCACT
AAATGGGCTT ATAACAGTAA CGACTATCAC GAGTGGACCT CTGAGTTCGT TAAAAATAAT
GGTTTAGACT TAGTTTATCA TTTGACCGAG ATAGCTGAAG TTGACGTTGA AGGCACCCTT
GATGGTTGTA CTTTTATTTA TGCTTTTACC GCTAAACTGC CGACGTTACA ATTTACCGCT
ACCATAGATA AAGTCGATAC AACAATGTGT TTTGCAGGTA AGAATGACAC CACACATAAT
GCCGGTGGAG TTTACGATCC TGCGGTATGG TTTGTAGCGC AAGAAATGAC CGGTAATGAC
CAAGAAACCG ACAAAGATAT ATTAGCAACA CCTGCCATAA AAGACATTAT TGAAGCGCAC
ACCACCAATA CTCAAATTGC GTTATTAACA GAAAATTGGG TTTCAAAAGA GATTAACGAT
GCTGTTATCT CTAACTATCA ACACTTAGTC ACTACGTTAA AAAAGCAGAG TGTTAAGGGC
ATTGCCCCAA ACATGTTTTT AAGCTTAATA AAGTACACTT ATTTGTTCTT CACGTTAGGG
ATGTTAATCG CGCTGTTATT TCCTTCATTT GCCGCAGAAA CAAGTCATCG CATGAGCGTG
TCACAAGTGC CTGAATGGAT AATGGCGTTA CTGATGATGA AATTTGGTTT ATTTGGGCTC
CCCGCTTATG TGAACTATGT GTTTGTCTTT GGACTACTGT GGTTAAGCTA TAAGAGTGTG
AAGAAGTGGT ACTGGAAAAA TATCGGTAAA ACTAAAATAT GGCTGTTAGC GATAAGCATC
ACACTATTAT TACCACATAT CGGCTTTTCA TCTTATTACA ATACGTTAGA ACTACTTAGA
CATTCACCCA CCATAGCAAG CTCCTTAGTG AGTGGATCGT TATTAGTCGG TGTTTACTTA
CTTATTTTTG GGGTGAAAAA ACCTAAAAGA TGGTATGGGA AATTGTTTGG TTTATTGGCT
GGGCTGGGTA TTTACTGCGC CATTCAATAT GGGCTTTACG TGATAAATCC AACGTATGGT
TTTGTGGTAG ATCATACTCA TTATGCCCGT GAGGTGACAA AACTATTAAC ATCGGCCTTG
GATTTTATGA AGCACAATGT CTTTGAGTGG GGCTTGTTAT CGATTAGCTT TACTTATTTT
TTAACCCGTA GACGTTTTTG GTTAAAAGCA AAAACAATGG TGGCGGATTA CGATAGCCCA
GTGCTACTAA AATCAATGAA TATGGATAAA TAG
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| Protein sequence | MSKLEQFQRF IRNNGKDLTG VDVPVILSNE QTKQPQLKFT FGWTIEVGVS QHEHGSYCPN
GIQSGSASNA RDYAHDKAKE YASGQNSLFN DRFLNILGPD IASNFLIRNR DLKSAPETYV
GSKVCYNCSG SGSQSCSNCH GSGKNSCTGC SGSGRISVSR FDSHNNRTVY TTESCSSCWG
SGKKTCYTCN GSGSVTCNTC NGGGYLYYSY TIDGDAKRST KWAYNSNDYH EWTSEFVKNN
GLDLVYHLTE IAEVDVEGTL DGCTFIYAFT AKLPTLQFTA TIDKVDTTMC FAGKNDTTHN
AGGVYDPAVW FVAQEMTGND QETDKDILAT PAIKDIIEAH TTNTQIALLT ENWVSKEIND
AVISNYQHLV TTLKKQSVKG IAPNMFLSLI KYTYLFFTLG MLIALLFPSF AAETSHRMSV
SQVPEWIMAL LMMKFGLFGL PAYVNYVFVF GLLWLSYKSV KKWYWKNIGK TKIWLLAISI
TLLLPHIGFS SYYNTLELLR HSPTIASSLV SGSLLVGVYL LIFGVKKPKR WYGKLFGLLA
GLGIYCAIQY GLYVINPTYG FVVDHTHYAR EVTKLLTSAL DFMKHNVFEW GLLSISFTYF
LTRRRFWLKA KTMVADYDSP VLLKSMNMDK
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