Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3147 |
Symbol | |
ID | 4280049 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 3765462 |
End bp | 3766655 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638135965 |
Product | transposase, IS4 family protein |
Protein accession | YP_751822 |
Protein GI | 114564308 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGCAA AACAAGTTTT ATCAAAATGC CTCTCACTTG TCACCCCGTT AATGCACAAA ACTCGCCGAC AAAGTCTGTT CTCTGCAATT GAAAGCTCAA TGAATGGTGG AGCATTATCA ATCACAGGGC TTGGCCGTGA TATTGAAAGT AAAGCCAAGG AAAAACATAA GATTAAGCGG GTTGATAGGC TTTGTAGTAA TCCTTATCTT CATCGTGATA TTGAGTTCAT TTATACCCGT ATGACCTGCT TGCTCGTCGG GAAAATGAAG CAACCCATTA TTCATATCGA TTGGTCAGAT CTTGATGACC GTAAGCAGCA TTTTCTCATT CGAGCATCTT TGGCGGCTCA AGGGCGCTCA TTGACACTTT ATGAAGAAAT ACATCCGCTA AACAAAAAAG AGAAGCCTAA AACTCATCTA TCCTTTTTGA CCAAACTTAA GGCGATGCTA CCTAATGACT GCAAGCCTAT CATCGTGACT GATGCTGGAT TTCGAATACC ATGGTTTAAA CAAATACTGT CACTTGATTG GGATTATGTG GGGCGATTCA GAAACAGAAC ACATTGTAGA AAAACGATTG TTCATCATTG GTATCCAGTC AAAAGGCTAT ACATACAAGC AAGTGCAAGA GCTAAGAATC TTGGGGTATA TTTTTTAGGT GAGCAGGCGT CTTTCTGTTC ACGCTTAGTG ATCTTCAAAC GTACAGATAA AGGAAGAAAA GATAGAACTG CAACGGGTGA TAGAACCAGA CGGAGCAAAC AATCTCGGTC AAGTGCAGAG CGTGAAAAAG AGCCTTGGTT ACTTGCTACA TCACTTTGTC ATTCAAGTGC TACAGCCAAA CGAGTCGTAA AAATTTATGC GACTAGAATG CAGATAGAAG AAAGCTTTAG AGATGTTAAA ACGGGTCTAA AAATGAATGA TAGTGGCAGT AGAATTAAGG ATAAATTAAG CGTTCTACTG CTCATTGCCT GTCTATCTCA ATTTATGTTG AACCTGCTAG GTTTGGCAGT TAAAGCAGCG GATAAGCATA GACAATACCA AGCGAATTCA ATCAAACATC GTAATGTTTT ATCAAGCCAA TTTATAGGAT TAAGAGCCTA CAGAGATAAG TATTTGAGGT TGTTGAAGTC TCACTGGCTA GCAGGAATAA AGACGTTACA AAGTTTAATC AAGGACCCAC AAGCATGCTA TTAA
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Protein sequence | MNAKQVLSKC LSLVTPLMHK TRRQSLFSAI ESSMNGGALS ITGLGRDIES KAKEKHKIKR VDRLCSNPYL HRDIEFIYTR MTCLLVGKMK QPIIHIDWSD LDDRKQHFLI RASLAAQGRS LTLYEEIHPL NKKEKPKTHL SFLTKLKAML PNDCKPIIVT DAGFRIPWFK QILSLDWDYV GRFRNRTHCR KTIVHHWYPV KRLYIQASAR AKNLGVYFLG EQASFCSRLV IFKRTDKGRK DRTATGDRTR RSKQSRSSAE REKEPWLLAT SLCHSSATAK RVVKIYATRM QIEESFRDVK TGLKMNDSGS RIKDKLSVLL LIACLSQFML NLLGLAVKAA DKHRQYQANS IKHRNVLSSQ FIGLRAYRDK YLRLLKSHWL AGIKTLQSLI KDPQACY
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