| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3118 |
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| Symbol | |
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| ID | 4280021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3729673 |
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| End bp | 3730380 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638135937 |
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| Product | lysine exporter protein LysE/YggA |
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| Protein accession | YP_751794 |
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| Protein GI | 114564280 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1280] Putative threonine efflux protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.159168 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGAATA ACTGTAGAAT CCGCGCCTTA TTTTCCGTCT TAATAGTTGT TGTTTGTGTG
TTTATGATGA TTGATCTGGC TTTGCTTCCG TTATATTTAA CTACTGTTGT CGCGTTATTA
TTAATTCCTG GACCTGATAT GTTGCTGATT GCCAGTTCGA GTCTGAGCTA TGGCCGTAAA
GTGGGCGTGT ATGCCAGTTT TGGTAATGCG ACCTCGGGAC TTATTTTGAC TTTACTTGCT
GCAATGGGCG TGTCCGCATT AGTGGCGATG AACCCGATGG CGTTAGAGCT ATTACGAGTA
TTGGGCGGGG CGTATTTATT GAAAATGGGC TGGGATTGCA TGCGCAGCAG TGGCAGCGAT
GCACCTGAGA TTGCACAACA GAATAACTTA GCCAAATTAC TCTATCGCCG TGCGGTAATG
AGCAATTTAC TTAATCCTAA AGCACTGATA TTTTTTGTGT TATTTTTGCC TCAGTTTGTG
TCTACTCAAT TGAGTGCTAG CTCAGGTGAA CAAATGCTGG CGCTAGGTTT GCTGCTGAAT
GTCATGGGAT TGACGTTCAA TTTGCTGTTG GTGGCATTAG TGGGCAGTTT GGGTAAACCT
CTACTTAATA ATGAAAAGTT TCGTACCTAT CAAAACAAGT TTATGGGCGT AATATTTTTT
GCATTAGCGA TTTGGTTATT GGCATCGCAA GTTCAAAGTA TTGCTTAA
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| Protein sequence | MLNNCRIRAL FSVLIVVVCV FMMIDLALLP LYLTTVVALL LIPGPDMLLI ASSSLSYGRK
VGVYASFGNA TSGLILTLLA AMGVSALVAM NPMALELLRV LGGAYLLKMG WDCMRSSGSD
APEIAQQNNL AKLLYRRAVM SNLLNPKALI FFVLFLPQFV STQLSASSGE QMLALGLLLN
VMGLTFNLLL VALVGSLGKP LLNNEKFRTY QNKFMGVIFF ALAIWLLASQ VQSIA
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