Gene Sfri_3094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3094 
Symbol 
ID4279997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp3699238 
End bp3699855 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content42% 
IMG OID638135913 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_751770 
Protein GI114564256 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGTTAA GTACTTGGCT GGGATTGTTA GCGATATGCT GTTTGGGTGC TATGTCTCCA 
GGCCCTAGTT TAGCCATGGT AGTGAGGCAT ACACTTAGTG GTGGAAGATT ACACGGTGTA 
GTGTGTGCTT GGGCGCATTC AATTGGTATT GGCGTGTATG CGCTGGTGAC TTTATTGGGC 
TTAGCTGCAA TATTAAAAGC ATCTCCATTA ATTTTTAATG CCATAGCGAT AATCGGAGCA 
ATTTACTTAG CTTGGATGGG TATTCAAGCG CTGGGTTCCA AAGGCGGGAT GCAGCAAAAG 
TTAGCTGCTG GGGAAGCCAC TAGTTTATGG GTTGCTGCTC GTGACGGGCT GGCTATTTCA 
CTGTTTAATC CTAAGATATT ATTGTTTTTT CTAGCCTTAT TTAGTCAATT CGTCTTGGCT 
GCACAAACGA CCACAGGCCA AGGATTAATA GTGTTCACCC CGTTAATTAT TGATGGCTTG 
TGGTATACCG TTATCGCATT TGTGTTATCA CATTCTGCTG TACTACCTAA GTTACGTGAA 
AAGGCAAAGT TGATTGATAG ACTCTCAGGT ATTGTATTGA TTTTACTTTC TATTAGGGTT 
ATTTACACGC TGTTATAA
 
Protein sequence
MTLSTWLGLL AICCLGAMSP GPSLAMVVRH TLSGGRLHGV VCAWAHSIGI GVYALVTLLG 
LAAILKASPL IFNAIAIIGA IYLAWMGIQA LGSKGGMQQK LAAGEATSLW VAARDGLAIS 
LFNPKILLFF LALFSQFVLA AQTTTGQGLI VFTPLIIDGL WYTVIAFVLS HSAVLPKLRE 
KAKLIDRLSG IVLILLSIRV IYTLL