| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3082 |
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| Symbol | |
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| ID | 4279985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3689181 |
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| End bp | 3691202 |
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| Gene Length | 2022 bp |
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| Protein Length | 673 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638135901 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_751758 |
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| Protein GI | 114564244 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATTA ATGTAGCGAC CAGAGTCATT GGTGGTTTTA CCGTGGTGAC ACTGTTATTG
ATGGTCCTCG GTGGCGTGAC CATGCTGAGT AACAACAGTA TTAAAGACGG GACGACTATT
CTTAAGACGA TCAGCCTACC TGCACTTGAA TCAACGAGTA TCTTAAGTGA GAATTTAAGC
ACCCAACAAA TTGAAGCATT ACTTGCTTAT TACAGTACTC ATTCATCAAA AATTCCAGCA
ATAGAAAAAA GACTCACTGA CTTAGATAAC GCATTTGAAA AAGATCTAGC TCGCTTAAAT
AATTTAGTAA GCAAACAGAA TCAACTTACT GCGCCGTTGG CAGCGTTAAC TAAAAGCTAC
GCAGTATATG AAGCGAGTGC TACAAAAATG CTCGTAGAGC GCGAAAGTGC CCTAAGCTTG
CAAGAAAAAT TACTCAAAAT GCGCAGTAAC CTTGAAAATG CTGCAGACGA CTCATCATCT
ATTTTATTAG ACATCATCGA CCTAGAAACT AGTGAAGATC AAACTGAACG CAGTTTGGCC
GCATCAGCCA GCCTCGTTGA TAGTACATTT ATCAATATCA TTACCACAAT TTATGATTTA
GTCGCCTCAA CCGAACAAAG CAAGTATGAC CTAATCATCA AAGAACTCGA TTACATGGTC
AGTGAAGCTT CATCCAAATT GGATCATATT GGCCGTCAAG GCAGTGGTAT TGTCAGCAGT
TCAATTTTAG AAGATTTAAC CACAGAAAGT GCAAAAGTCT TTAAGTTACT AAAAGGCAGC
GACTCACTTT TAGCCCTAAA ACAACAACAA TTAAATCATG AGTTTGCTGC TGCTAAACAG
TTAGCAGATA CGCAAAGCTC AGCCAAAGAC GTCAACAAAA AAATGACCGT GTTAGCAAAA
TCAATCGACA CGTTCGCGGG AGATATCAGC ACTACAGCAT TAGAAATTAT TGATTCTGCA
GCCATTAAAA CGCTACTGGT GGTATTAACC GCCATCATCG TCGCCATTAT TGTCAGTATT
GCTGTTGTTA AACCACTGAC CCGCTCGTTA GAGAAAGTCA ATAAAGCCTT AAATGTTCTA
GCATCGGGTG ATTTAACCCA TAAATTAGAT GACACTGGCC ATGATGAATT CGCAGAATTA
GCCAAAAACT GCAACCGATT AGTCGACAGC CTACGGAGCC TTATTGTTGG TATCGTTGAT
CGTTCAAATC AGTTAGCTGC TGCGGCAGAA GAAACCTCTG CGATTACCTC GCAAACCACT
ATTGGTATTC AAGAACAAAA GAGTCAAGTG GACCAAGTTG CTGCGGCAAC CACGGAACTG
AGTTCAAGTG CACAACAGGT ATCAATGAGC GCTGATCAAG CACTGAATGA GATTAAACAA
GCTGACCAAG AAACACAGCA TATGCGTACG CTTGCAGAAG AAAGCAAAAA TACCATTCTT
GCTCTTGCTG AAGAAGTTGC TAAAGCTGGT ATTGTTATTA ATAAAGTCCA TTCCGACAGT
GCGTCAATCG GCTCTATTTT AGATGTGATC CGCGGGATTG CAGATCAAAC TAACTTACTT
GCCCTAAACG CTGCTATTGA AGCAGCTAGA GCTGGCGAAC AAGGACGAGG CTTTGCCGTT
GTTGCTGATG AAGTACGTAA CTTAGCGTCA CGCACCCAAC ACTCAACCAG TGAAATTCAG
CAGATGATTG AAGTATTGCA ACTTGGTACG CAAGAAGCCG TTGCGGTTAT GGAATTAGGT
CGTACTCAAG CAGAGAGCTG TGTTGAAAAG AACGAACAAT CAAATCTAGC CTTAGAGACC
ATTAGTAAGT CAGTTCACCG AGCCTTTGAT TCTGGTAACC ATATTGCTCA AGCTGCTCAA
GAGCAAAATA TCGTTAGCCA GCAAGTTTCA GAGAAGCTCG AACATATTGC CTCTATTTCA
GAAGAAACCT CGATAGGTGC AGATCAAACC GCACAATCAA GTCAGCAAGT CGCTATGCTT
GCTGAAGAAC TGCAAGCCTC GGTACGCGAG TTCAAGGTTT AA
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| Protein sequence | MKINVATRVI GGFTVVTLLL MVLGGVTMLS NNSIKDGTTI LKTISLPALE STSILSENLS
TQQIEALLAY YSTHSSKIPA IEKRLTDLDN AFEKDLARLN NLVSKQNQLT APLAALTKSY
AVYEASATKM LVERESALSL QEKLLKMRSN LENAADDSSS ILLDIIDLET SEDQTERSLA
ASASLVDSTF INIITTIYDL VASTEQSKYD LIIKELDYMV SEASSKLDHI GRQGSGIVSS
SILEDLTTES AKVFKLLKGS DSLLALKQQQ LNHEFAAAKQ LADTQSSAKD VNKKMTVLAK
SIDTFAGDIS TTALEIIDSA AIKTLLVVLT AIIVAIIVSI AVVKPLTRSL EKVNKALNVL
ASGDLTHKLD DTGHDEFAEL AKNCNRLVDS LRSLIVGIVD RSNQLAAAAE ETSAITSQTT
IGIQEQKSQV DQVAAATTEL SSSAQQVSMS ADQALNEIKQ ADQETQHMRT LAEESKNTIL
ALAEEVAKAG IVINKVHSDS ASIGSILDVI RGIADQTNLL ALNAAIEAAR AGEQGRGFAV
VADEVRNLAS RTQHSTSEIQ QMIEVLQLGT QEAVAVMELG RTQAESCVEK NEQSNLALET
ISKSVHRAFD SGNHIAQAAQ EQNIVSQQVS EKLEHIASIS EETSIGADQT AQSSQQVAML
AEELQASVRE FKV
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