| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3074 |
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| Symbol | |
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| ID | 4279977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3680350 |
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| End bp | 3681048 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638135893 |
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| Product | nucleotidyl transferase |
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| Protein accession | YP_751750 |
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| Protein GI | 114564236 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCGA TGATTCTGGC TGCAGGTCGT GGGGAGCGTT TGCGCCCGTT AACAGACTCC
TTACCTAAAC CATTAGTGAG TGTTGCAGGT AAACCTTTAA TTGAATATCA CTTAGAAAAA
CTCGCGTTAA TTGGTGTGAC TGAGGTCGTG ATTAATCAAG CTTGGTTAGG GTATAAGTTA
CCTGAAATGC TAGGTGATGG TAGTCGATGG GGTTTGCAGA TTAACTATAG CGAAGAAACC
ACAGCGTTAG AAACTGCTGG GGGGATCAAG CAAGCATTAC CTTGGTTGGG GGACGAACCT
TTTTTGGTTA TCAATGGTGA TATTTTTATC GATCACTTGC CCGACGTCAC CTTGGCTTAT
CAGCGCGTTT ACCAAGGTGA AGCACAAGCT TATTTGTGGT TAGTGGATAA TCCAGAACAT
CATCAACAGG GTGATTTTGC TATTGATGCC CAAGGTAAAT TAACCTTGAG CGATGAACAA
AGGTTAACGT TTGCTGGACT GGGGATTTAT CATCCTCAAT TATTTAGTCA GTTGCCTGAA
GGTAAACAGG CTTTGGGTCC TTTGCTTAAA GAATCCATTG GCCAGCAACA AATACAAGGT
GAGCATTTTG ATGCTTATTG GTGCGATGTC GGCACACTTG AGCGATTGGA TAAATTACAG
CGTCGCTTGG TCGATATAGA GACTCTGTTA CCGCTTTAA
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| Protein sequence | MKAMILAAGR GERLRPLTDS LPKPLVSVAG KPLIEYHLEK LALIGVTEVV INQAWLGYKL
PEMLGDGSRW GLQINYSEET TALETAGGIK QALPWLGDEP FLVINGDIFI DHLPDVTLAY
QRVYQGEAQA YLWLVDNPEH HQQGDFAIDA QGKLTLSDEQ RLTFAGLGIY HPQLFSQLPE
GKQALGPLLK ESIGQQQIQG EHFDAYWCDV GTLERLDKLQ RRLVDIETLL PL
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