| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3002 |
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| Symbol | |
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| ID | 4279906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3603898 |
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| End bp | 3606015 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638135822 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_751679 |
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| Protein GI | 114564165 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.568622 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGCAT TATCCATTAA GACAAAGTTG TTATGGATCA CCTCAGCGTT ATTTGTTACC
ACAGTTATCG TACTCTCTTT AAGTTTATGG TTAGGTCTAA AAGATAAGAA TAGCAGCTTG
GCCGCAGAAG TAGAGGTTGC GTTACAGCAA GAGATTAAAG ATAAACTCTC AGCAAGAGCT
GGTGAGTATG GTGAACGTAT TGCTGGATTT ATCAATGAGG CTTATAGAAT TCCCTTTTCG
TTTGCAGGCT TACTTGAGCA AACTTCAAAA AAAGATCCTC TAAGTCGTGA TCGAATGGAG
TTGTCTTTAG CCGCAATATT GCAAAAAAAT AACATAATAT CATCGATGTA TGCGCAATTT
GAGCCCAATG GTTACGATGG ACTTGATAGT AGTTACTTTC AAGGTAGCAG TCACAGTGTA
CCGAATGTAG GCACATTAGA AATTTACTAT ACCCGTAATG GTGATGGCAC AGTAGAACAG
AATCAAGTTG ATGAGGCAGC TGAAAAATAC ATTACCACGT TAAATGAGTT TGGCGTTCGC
GAAGCTGAGT GGTATTTGTG CGCTAAAGAC ACTAAAAAGT CGTGTTTAAT GGAACCGTAT
TTATATGAGA TCACTCCGGG AAACACTGCA TTAATGACTT CGTTAACCGT GCCCGTTATC
GTCGACAATC AATTTAAAGG TCTTGTTGGC GTTGATATTA ACTTGCCAAT TTTTCAAACC
ATGATCATGC AATTATCTAA AAGCTTATAC GGTGGGCAAG CCAAGGTGAC CTTGGTGAGC
CAGAAAGGTT TTGTGGTAGC AGCTAGCCAT TATAAAAAGT TTGCGCGACC TTTTAGCGAA
TCTGTCGGGC CAGAATTAGC CAAAAAACTG TTAGCCTTAG ACAGTTCTTC GGATTTTGTT
AATGAACCTA CCAGCATTGC CGTGGCATAT CCTATTAATA TCCCAATTGC TGATGCAACT
TGGTCATTAA TTATTGAAGT GCCGAAAAAT AAAGCGTTTA TGGCGGTAGA TAATATGAAT
ACTGCCATGA ATGACATGGC GATGTCTCTG GGCAGTTTGC TATTAACTAT TGGTATTATT
GTTACAGTCA TAGCGGTGCT TATTATTAGC TTAGTCATTC GTAGTATTAT TTCTCCACTT
AATATGATCC AAGCTCGCGT CGAAAACCTT GCCAGCGCTG AAGGCGATTT AACTCAAGCG
ATAGAAGTCG ATGCCCATGC GGAATTGATT GCACTAGGCA GCGGTATTAA TGCCTTCATT
GCGAAATTGC GTCATCTCAT TTCAGAGCTT AAAATTCTTG CTGACCGTTC ACAACAAGAA
AGTATAAAAT CGGCAGACAT TGCTAAGCAC ACTCGCGAAA GTGTTAATCG CCAATATGGT
GAAATTGAAA GTGTGGTCAC TGCAGTTAAT CAAATGAGTG CTACCGCGCT TGAAGTGGCT
AAAGCTTCTG AGCAAACGGC AATGGAAACC GAGTCAATGA CGGTCAATGT GAAAGACGGT
CAATCGCGGT TAACTCAAGC GATGGTATTT GTAGAGGGAG TCTCGGGTGA TTCTGCACAA
GCTCAACAAG CGGTAGGTAT GGTGTCGCAA AGCAGCGCCA ATATTAGCCG CATTTTAGAG
GTGATTAGCT CTATTGCTGA GCAAACTAAC CTATTAGCGT TAAACGCAGC TATTGAAGCT
GCCAGAGCGG GAGAACAAGG TCGAGGTTTT GCTGTTGTTG CTGATGAGGT GAGAACGCTA
GCGTCTAGAA CTCAAACGTC GACGAATGAA ATCAGTACCT TGATTGAGTC GTTACAAAAA
GAAGTTAAAA ATGCCTCGAG CATTATTGAT AAAGGCGCCC AAGGTGCACA AAAAGCGGTT
GAGCAAACTC AGCTAGCATT ACAATCACTG AATGCCATCG TTGAACAAAT TAACCAAGTG
TCAGGCCAAG TGACCCACAT TGCGACAGCC GCGGAAGAGC AAAGCGCAGT AACCGAAGAA
GTAAATCGTA ATATTACGGG TATTTCAGAC TCAGCTGCTG AGTTATCACA GTTGGCTGAC
AGTGCTCAGC AGAGCAGTGA CAGCTTAGCT GATTTAGTTC AACAGCAGCA ATTGCAATTA
GGACGGTTAA GAACTTAA
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| Protein sequence | MKALSIKTKL LWITSALFVT TVIVLSLSLW LGLKDKNSSL AAEVEVALQQ EIKDKLSARA
GEYGERIAGF INEAYRIPFS FAGLLEQTSK KDPLSRDRME LSLAAILQKN NIISSMYAQF
EPNGYDGLDS SYFQGSSHSV PNVGTLEIYY TRNGDGTVEQ NQVDEAAEKY ITTLNEFGVR
EAEWYLCAKD TKKSCLMEPY LYEITPGNTA LMTSLTVPVI VDNQFKGLVG VDINLPIFQT
MIMQLSKSLY GGQAKVTLVS QKGFVVAASH YKKFARPFSE SVGPELAKKL LALDSSSDFV
NEPTSIAVAY PINIPIADAT WSLIIEVPKN KAFMAVDNMN TAMNDMAMSL GSLLLTIGII
VTVIAVLIIS LVIRSIISPL NMIQARVENL ASAEGDLTQA IEVDAHAELI ALGSGINAFI
AKLRHLISEL KILADRSQQE SIKSADIAKH TRESVNRQYG EIESVVTAVN QMSATALEVA
KASEQTAMET ESMTVNVKDG QSRLTQAMVF VEGVSGDSAQ AQQAVGMVSQ SSANISRILE
VISSIAEQTN LLALNAAIEA ARAGEQGRGF AVVADEVRTL ASRTQTSTNE ISTLIESLQK
EVKNASSIID KGAQGAQKAV EQTQLALQSL NAIVEQINQV SGQVTHIATA AEEQSAVTEE
VNRNITGISD SAAELSQLAD SAQQSSDSLA DLVQQQQLQL GRLRT
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