Gene Sfri_2970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2970 
Symbol 
ID4279875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp3568980 
End bp3569456 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content43% 
IMG OID638135790 
Producthypothetical protein 
Protein accessionYP_751648 
Protein GI114564134 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.466871 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGAATAA TCTTCATATT ATGCTGTTTG CTATTGAGCT TTCCGAGCAA AGCCAATATT 
GGCGATATGC CACGAGAACA ACAACTTGCG ATGCAATACA TGGAAGCGCT CACGGATCAT
GACTATACCG TCCTGCGTCG TTTCTACTCT CGCGACACAG TATTTTACGA TAAAACAGCC
AATACGACTT ACACTGGTGG TCGGCATATT ATTGCGTTTT TACAACGGGC TCACGAAGGC
GTATTAGAAT ACCGCTTAAA CGTAGAACAC ATGTTTAATA CCGGCTCTCT CGTGGTGATT
ATCGGCAGTT ACCGATTACG AGGTCCCGGC GATCAATATG GTAAACCCGG TAAAATTATC
GACCTTGCAG TACCAGGCGT CACCACACTA AAATTTGATA ACAATACTGA GCGCTTAATT
GAACAAATGG ACTTAATGGA TTACCAGACC ATGTCTGACC AACTTGAATC TCAGTAA
 
Protein sequence
MRIIFILCCL LLSFPSKANI GDMPREQQLA MQYMEALTDH DYTVLRRFYS RDTVFYDKTA 
NTTYTGGRHI IAFLQRAHEG VLEYRLNVEH MFNTGSLVVI IGSYRLRGPG DQYGKPGKII
DLAVPGVTTL KFDNNTERLI EQMDLMDYQT MSDQLESQ