| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2941 |
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| Symbol | nhaA |
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| ID | 4279846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3528582 |
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| End bp | 3529766 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638135761 |
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| Product | pH-dependent sodium/proton antiporter |
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| Protein accession | YP_751619 |
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| Protein GI | 114564105 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3004] Na+/H+ antiporter |
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| TIGRFAM ID | [TIGR00773] Na+/H+ antiporter NhaA |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.135486 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAACGAG CAATTAAGAA CTTCTTAAGC CAAGAATCTG CAGGTGGCAT TTTATTAATG
GTCGCAGTAG CTTTGGCGAT GATTTTAGCA AATTCCCCGT TAGCTGGAGT ATATCAAGGT
TTTTTAGCCA CAGAAGTACA GCTACGTGTG GGCGATTTAG ATATCGATAA GCCGTTATTA
CTGTGGATTA ATGATGGGCT AATGGCGTTA TTCTTTTTAT TAATTGGTTT GGAAGTGAAG
CGCGAATTAC TTGAAGGGGC CTTATCAAGT GTGGCCAAAG CTTCATTACC CAGTATTGCT
GCTATTGGCG GCATGGTGTT TCCGGCGTTG TTTTACTTAG CATTTAACTA CGCAACCCCC
GAAACTCAAG TCGGATGGGC TATTCCTGCC GCTACAGACA TCGCTTTTGC TTTAGGTATT
ATGGCATTGC TCGGTAATCG TGTACCTGTG GCATTGAAGG TGTTTTTATT AGCCTTAGCG
ATTATTGATG ATTTGGGCGT TATTGTCATT ATTGCCTTGT TTTATAGTAC TGATTTATCC
ATGACAAGCT TGGTCATTGC AGCGGTATCG ATTGTGCTTA TGGTTGCATT GAACAAAAAA
GGGGTCAGTT CAATTTTACC TTACGGTTTA CTTGGTTTTA TTTTATGGGT CGCCGTATTG
AAGTCTGGTG TACACGCGAC ATTGGCAGGT GTAATTATTG CATTTTGTAT TCCTTTACGT
GCAAAGGATG GTACTTCACC ATCGGAACAT TTAGAGCATA AGTTGCACCC CTGGAGCACC
TTTATGATCC TGCCCGTGTT CGCTTTTGCT AATGCTGGTT TGTCATTAAC GAATATGACT
TTAGATTCAT TTGCTGAACC CATTACCTTA GGCATTATTA TGGGTCTGTT GCTCGGTAAG
CCGATTGGGG TGCTGTTATT CAGTTATTTA GCCGTGAAGC TTAAGTTAGC AGAACTACCA
CCAGGGATTG GTTGGAGACA CATTATTCCT GTTGCAGTGA TGTGTGGTAT CGGATTTACT
ATGTCAGTGT TTATTGCTTC GTTAGCGTTT GAACATTCAC CTGCGGCATA TGGTGATTAT
GCAAGACTTG GTATTTTAAC AGGATCGTTA TTAGCAGCAC TAATTGGTTA TTTTTGGTTA
GCCAAAGTAC TGCCTGAAAC AGGAGAAAAA CATGAAACTC ACTAA
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| Protein sequence | MERAIKNFLS QESAGGILLM VAVALAMILA NSPLAGVYQG FLATEVQLRV GDLDIDKPLL
LWINDGLMAL FFLLIGLEVK RELLEGALSS VAKASLPSIA AIGGMVFPAL FYLAFNYATP
ETQVGWAIPA ATDIAFALGI MALLGNRVPV ALKVFLLALA IIDDLGVIVI IALFYSTDLS
MTSLVIAAVS IVLMVALNKK GVSSILPYGL LGFILWVAVL KSGVHATLAG VIIAFCIPLR
AKDGTSPSEH LEHKLHPWST FMILPVFAFA NAGLSLTNMT LDSFAEPITL GIIMGLLLGK
PIGVLLFSYL AVKLKLAELP PGIGWRHIIP VAVMCGIGFT MSVFIASLAF EHSPAAYGDY
ARLGILTGSL LAALIGYFWL AKVLPETGEK HETH
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