| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2913 |
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| Symbol | |
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| ID | 4279818 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3502346 |
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| End bp | 3504292 |
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| Gene Length | 1947 bp |
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| Protein Length | 648 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638135733 |
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| Product | chorismate mutase |
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| Protein accession | YP_751591 |
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| Protein GI | 114564077 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0077] Prephenate dehydratase
[COG1605] Chorismate mutase
[COG2876] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
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| TIGRFAM ID | [TIGR01797] chorismate mutase domain of proteobacterial P-protein, clade 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAAAC CACCTGAGTT AAGTCAAACT CGCGAACAGA TAACTGCACT GGATAAATCC
TTATTAGCGT TACTATCTCA GCGCCGCCAA TTGAGCCTAA ATGTTGCACG CAGCAAAGAA
GTTGATGTTA GACCTATTCG AGATACACAA CGAGAGAAAG AGCTACTTGA AAGACTCGTG
CAGCAAGGGC GTGACCAAGG ACTTGATGCG CACTTTGTGA TATCGCTTTA TCAAAGCATT
ATTGAAGACT CAGTGTTATT TCAGCAGACG TATCTTCATG GTAGAGCAAA CCCAGACACT
CAAAAGCAGC AATATACTGT GGCTTATTTA GGTGCAAGGG GTTCTTACTC TTACTTAGCG
GCAAGCCGTT ACTGCTCACG CCGTCAGGTG GAAATGCTAG ATTTTGGGTG TAAAAGTTTT
GATGAAATCG TTAATGCCGT CGAATCAGGT CATGCCGATT ATGGCTTTTT ACCAATTGAA
AATACTTCTT CAGGATCTAT CAATGAAGTG TATGACGTAC TTCAACATAC AACGCTATCG
ATTGTGGGCG AAACGACTAT TGAAGTGAGC CATTGCTTAC TCACTAAACC TAACAGTAAA
CTATCTGATA TCAAGACTAT TTACGCTCAT CCACAACCAA TCAGTCAGTG CAGCCGCTAT
TTGAGTCAGC ACCCACATAT CAAACTTGAA TATTGTTCTA GTAGTGCTGA AGCTATGACA
AAAGTTGTCG AGGCAGACAA CAACACTGTC GCAGCAATAG GCAGTGCTGA AGGCGGAGCG
TTATACCAAT TAATTGCAAT GGAACAAGGT TTGGCAAACC AAAAAATCAA CCAGAGTCGT
TTTATCGTTG TCGCTCGAAA AGCTTCTGCG GTGCCTTCTC AGCTGCCAGC AAAAACCACC
TTGATCATGG CAACAGGACA GAAACCTGGA GCATTAGTGG AAGCACTACT GGTACTTAAA
GCTCATAATT TGAATATGAG TAAGTTAGAA TCTCGTCCGA TACCAGGGAC ACCATGGGAG
GAGATGTTTT ACCTCGATAT TGATGGCAAC TTAGCGACTA CCGAAGTACA ACAAGCAATT
AAAGAGTTAG AGCGCCTTAC ACGTTTTATC AAAGTATTAG GTTGTTATCC TTGTGAAACT
GTTAAACCGA CACAATTATC GCAAGCTCAG TTATTGATTG AACCCGGTAG CTCTAAACAA
GAGCCAATCA AGACGGTACC CCATAGCCAA GCTAAGCATT CACGCGACTA TAAATCACAA
GATACTCAAT TGTTTTGCCA GCACTTACAA ATAGGTGCAG GACAATTTAG CGCATTACAA
CAAATTAACT TACCGATAGA TAATACCGAA CTGGCTACGC AAGCAAAGCA CATCAAAGAA
TCAGGCTTTC AAGCTATTGT GCTCAATGAT TTAAAACAAC AACTCAATGA ACAACAATTA
AAGCAGCATG CACAGGTCAT TGAACAAGCC GGTTTATTAT GTGTAATGCA AATAGACCAA
GAACAAGAAT TTATCATTGC GAGCCAATTA GCAGATATGC TGATATTAAG TGGTAAACAA
ATGTATAACC CAGACATGTT AACCTTAATT GGTTCCGTCA ATTTACCGGT AATATTAGAA
AGAAATACCA TGGCTAGTAT TGATGATTGG CTACAAGCTG CCGATACAGT CCTTAGCCAC
GGAAATCAAC AGCTCGGGCT ATGCGAATCA GGTGTACGCA GTTTCACGCA CCCAGAGCAG
TTAAGCCTCG ATTTGGCTGG ATTGGTTGAG GTGAAATCTC GCAGCCATTT ACCCGTCATC
GTTAACACCA GCTTCAGCAT TAATGCTGCA CTTCTAAATA CTCATGCAAA TGCCGTTAAG
CAACTTAATG CTGATGGAAT TATATTGTTA CATCAGGATG GAGTATCGCA AGCTGAAATT
ATTCATGGTT TATACCAAGC AAAGTAA
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| Protein sequence | MQKPPELSQT REQITALDKS LLALLSQRRQ LSLNVARSKE VDVRPIRDTQ REKELLERLV
QQGRDQGLDA HFVISLYQSI IEDSVLFQQT YLHGRANPDT QKQQYTVAYL GARGSYSYLA
ASRYCSRRQV EMLDFGCKSF DEIVNAVESG HADYGFLPIE NTSSGSINEV YDVLQHTTLS
IVGETTIEVS HCLLTKPNSK LSDIKTIYAH PQPISQCSRY LSQHPHIKLE YCSSSAEAMT
KVVEADNNTV AAIGSAEGGA LYQLIAMEQG LANQKINQSR FIVVARKASA VPSQLPAKTT
LIMATGQKPG ALVEALLVLK AHNLNMSKLE SRPIPGTPWE EMFYLDIDGN LATTEVQQAI
KELERLTRFI KVLGCYPCET VKPTQLSQAQ LLIEPGSSKQ EPIKTVPHSQ AKHSRDYKSQ
DTQLFCQHLQ IGAGQFSALQ QINLPIDNTE LATQAKHIKE SGFQAIVLND LKQQLNEQQL
KQHAQVIEQA GLLCVMQIDQ EQEFIIASQL ADMLILSGKQ MYNPDMLTLI GSVNLPVILE
RNTMASIDDW LQAADTVLSH GNQQLGLCES GVRSFTHPEQ LSLDLAGLVE VKSRSHLPVI
VNTSFSINAA LLNTHANAVK QLNADGIILL HQDGVSQAEI IHGLYQAK
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