17 homologs were found in PanDaTox collection
for query gene Sfri_2884 on replicon NC_008345
Organism: Shewanella frigidimarina NCIMB 400



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008345  Sfri_2884  type IV pilus assembly protein PilX  100 
 
 		 150 aa  303  7e-82  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.245719  n/a   
 
 
-
 
NC_009438  Sputcn32_1065  type IV pilus assembly protein PilX  54.79 
 
 		 144 aa  146  8e-35  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_009052  Sbal_1060  type IV pilus assembly protein PilX  52.67 
 
 		 153 aa  145  1.0000000000000001e-34  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_009665  Shew185_1127  type IV pilus assembly protein PilX  52.67 
 
 		 153 aa  144  3e-34  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_011663  Sbal223_3229  hypothetical protein  52 
 
 		 153 aa  143  6e-34  Shewanella baltica OS223  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009997  Sbal195_1162  type IV pilus assembly protein PilX  52 
 
 		 153 aa  144  6e-34  Shewanella baltica OS195  Bacteria  normal  1  normal  0.834518 
 
 
-
 
NC_008577  Shewana3_3130  type IV pilus assembly protein PilX  53.33 
 
 		 153 aa  143  8.000000000000001e-34  Shewanella sp. ANA-3  Bacteria  normal  1  normal  0.706597 
 
 
-
 
NC_004347  SO_3526  hypothetical protein  53.33 
 
 		 153 aa  142  1e-33  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009831  Ssed_1200  type IV pilus assembly protein PilX  52.74 
 
 		 144 aa  139  9.999999999999999e-33  Shewanella sediminis HAW-EB3  Bacteria  hitchhiker  0.00971414  normal  1 
 
 
-
 
NC_008321  Shewmr4_2951  type IV pilus assembly protein PilX  50.67 
 
 		 150 aa  137  3.9999999999999997e-32  Shewanella sp. MR-4  Bacteria  normal  0.114107  normal  0.117946 
 
 
-
 
NC_008322  Shewmr7_3033  type IV pilus assembly protein PilX  48 
 
 		 156 aa  132  9.999999999999999e-31  Shewanella sp. MR-7  Bacteria  normal  1  normal  0.0748735 
 
 
-
 
NC_010506  Swoo_1297  type IV pilus assembly protein PilX  50.35 
 
 		 142 aa  132  1.9999999999999998e-30  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  0.627345 
 
 
-
 
NC_008700  Sama_0930  type IV pilus assembly protein PilX  47.97 
 
 		 156 aa  131  3e-30  Shewanella amazonensis SB2B  Bacteria  normal  0.881011  normal  1 
 
 
-
 
NC_009901  Spea_1089  type IV pilus assembly protein PilX  45.77 
 
 		 145 aa  126  8.000000000000001e-29  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_009092  Shew_1105  type IV pilus assembly protein PilX  51.03 
 
 		 144 aa  114  6.9999999999999995e-25  Shewanella loihica PV-4  Bacteria  normal  0.711381  normal  1 
 
 
-
 
NC_007954  Sden_2717  type IV pilus assembly protein PilX  52.74 
 
 		 142 aa  105  3e-22  Shewanella denitrificans OS217  Bacteria  normal  1  n/a   
 
 
-
 
NC_003910  CPS_1215  hypothetical protein  26.22 
 
 		 182 aa  58.9  0.00000002  Colwellia psychrerythraea 34H  Bacteria  normal  0.684436  n/a   
 
 
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