| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2881 |
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| Symbol | |
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| ID | 4279786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3464139 |
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| End bp | 3464651 |
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| Gene Length | 513 bp |
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| Protein Length | 170 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638135701 |
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| Product | methylation site containing protein |
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| Protein accession | YP_751559 |
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| Protein GI | 114564045 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAGAA CTAGCGGATT TACTCTTATT GAGTTGATGG TAACAGTAGC CGTTTCGGCA
ATTTTGTTGG CTGTCGCTGC GCCTTCGTTT ACTTCGTTAT ACAATAATAC CCGCGCGGCT
TCTGCAATCG GAAATATCGA AAGTTCTATG GCATTCGCAA GAAGCCAAGC TGTTAATTTT
GGTAGAAAAG TATCTGTTTG TCCAGGAAAT GGGAGTAGTT GTTCGGGGAG TTGGAATAAT
GGCTACATTA TTTTTATTGA TGATAATGGA GATAAAACTG CCGACAATGG AACTGAAGTG
TTAAAGAGGA TACAAGGTTT TAACTCTAAA GATTTTATTA AAGCATCGTC TACACTAATA
ACGTTTGGTA TGGATGGAAT GCTAAGTAGC ACAAGCTCAA TAAGTATTCA CTATTGTCCG
TCTAAGAAAA ATAGTGAATA CTCTAAAGGC ATTAGCATCA GCCCATCGGG GAAAATAGCA
GCCATCAACA CTGATGTAAA TTGCAATTCA TAG
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| Protein sequence | MRRTSGFTLI ELMVTVAVSA ILLAVAAPSF TSLYNNTRAA SAIGNIESSM AFARSQAVNF
GRKVSVCPGN GSSCSGSWNN GYIIFIDDNG DKTADNGTEV LKRIQGFNSK DFIKASSTLI
TFGMDGMLSS TSSISIHYCP SKKNSEYSKG ISISPSGKIA AINTDVNCNS
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