| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2807 |
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| Symbol | |
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| ID | 4279712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3378967 |
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| End bp | 3379746 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638135625 |
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| Product | VacJ family lipoprotein |
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| Protein accession | YP_751485 |
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| Protein GI | 114563971 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2853] Surface lipoprotein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGTATA AATGGATATT ACTTCAGGTG TTTGTTGCAG TTAGCATGCC CGCGTATGCC
GAAACCGAAG CACCTCAAGT TACCACATCA TCACGACCTG CGGTTGAAAT TAAATATAAT
GATCCTCGCG ATCCATTTGA AGAAGTTAAC CGCACAATGT GGGACTTTAA CTATCTGTTT
TTAGATAGGT ATGTTATTCG CCCGGTTGCT CATGGTTATA AAGACTATGT TCCTAATCCT
GTCAGAACGG GGGTTAATAA TTTTGTTTAT AACCTAGAGG AACCTAGCTC TCTGGTGAAT
AATACCTTAC AAGGAAAGTG GGGGTGGGCT GCTAATGCAG GAGGTCGTTT TACGGTTAAT
ACTACCATCG GTTTACTGGG TTTAGTCGAT GTTGCTGACA TGATGGGGAT GCACCGTAAA
CAAGATGATT TTAACGAAGT GTTAGGTTAT TACGGTACAC CAAATGGTCC TTATTTTATG
GCGCCGTTTT ATGGCCCAAT TGTGACAAGA GAAATCGCCT CTGATTGGGT GGATGGTCTA
TACTTTCCTT TATCAGAGTT AACGATATGG CAGTCAGTAT TAAAATGGGG CTTAAAGGGC
TTAGATGCAC GTTCTAAAGC CATTGATCAA GAAAGATTAT TAGACAATGC TCTTGATCCT
TATGCTTTTG TAAAAGATGC CTATTTGCAG CATATGGATT ACAAAGTTTT TGATGGTGAT
GTGCCATCTA GTCAAGCGGA CGATGAGTTA CTTGACGAAT ATTTAGATGA ACTAGAATAG
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| Protein sequence | MKYKWILLQV FVAVSMPAYA ETEAPQVTTS SRPAVEIKYN DPRDPFEEVN RTMWDFNYLF
LDRYVIRPVA HGYKDYVPNP VRTGVNNFVY NLEEPSSLVN NTLQGKWGWA ANAGGRFTVN
TTIGLLGLVD VADMMGMHRK QDDFNEVLGY YGTPNGPYFM APFYGPIVTR EIASDWVDGL
YFPLSELTIW QSVLKWGLKG LDARSKAIDQ ERLLDNALDP YAFVKDAYLQ HMDYKVFDGD
VPSSQADDEL LDEYLDELE
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