| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2796 |
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| Symbol | |
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| ID | 4279702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3364745 |
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| End bp | 3366016 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638135615 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_751475 |
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| Protein GI | 114563961 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATTTA CGTCGCTAGG GTTACCGCCA TTATTATTAG ATGCGGTTAA TCAATCTGGG
TATCAAACTG CTACTCCTGT CCAACAAGCT GTGATCCCAC TAGCGCTAGA TGGCCGAGAT
GTGTTGGCCA GTGCCGAAAC CGGTACCGGA AAAACAGCTG CTTTTGCGTT ACCTTTACTA
AGCCATTTGA TGAATCAAGA TCATTCAGAC TTATTGCCAG CAAATCGTTT ACGCGCATTA
ATTATGACTC CGACTCGTGA GTTAGCGATT CAGATTGAGC AAAATTTAGT TAAGTACAGC
CAGTTTATCA ATCTGACCAG CTTAGCCGTT TATGGTGGCG CGAGTATCAA TCCTCAGCGT
AAGGCATTAG AGCAAGGCAT AGATATTTTA GTGGCAACGC CAGGACGATT GTTTGACATT
ATTGGCCAGC ATGAATTGGA TTTATCTTTT GTTACCCACC TAGTGATTGA TGAAGCTGAT
CGCATGCTTG ATCTTGGTTT TGTTAAAGAT ATTGAAAAAG TGAAGCGTTT AATCGCCAGA
CAACACCAAA CTATGATGTT TTCTGCTACT TTTTCTGAAG ACGTTAAAAC CCTTGCCGCT
AAAATGCTAA ACAACCCTGA ATACGTTCAT GTTGAAACCC AAACTACAGC CGCTAATGTT
GTCCAGCAAG TGTACCAAGT GGATACCCGC CGTAAAGCCG AACTGTTATC TGAATTAATT
GGTAAGCATA ACTGGCAGCA AGTTATGGTA TTCACCAGCC GCAAAGAAAC AGCAGATCAT
TTATACCGTG AATTAAGCTT AGACGGCATT AAGTCATCGG TATTTCACGG TGATAAAAGC
CAAGGGGCTC GAAATCGTGC GTTGGAAGAG TTTAAAACCG GTCAATTACG CGTGTTAATC
GCTACCGATT TGGCCGCTCG AGGGCTTGAT ATCCAAGCTC TGCCAAGAGT CATTAACTTT
GAATTACCTG AAGAGTGCGA AGATTACATT CACAGAATCG GGCGTACTGG TCGTGCTGGA
TTAGGCGGTG AAGCGATTTC TCTGGTGAGT CCACAAGAGC TAGAGTTGCT TGGCGCGATT
GAACAACTTA TTGAACAATC ATTGCCGATA TTGGTGCCGA CAGGATACGA GGAAGGGGCG
CCATTACCTG CTCGATATCG CGATGTTGCG GCAGAGAAAC CGAAAAAGGT ACTTAAGTAC
AAACGTGGTA AGCCATCGCA AACTGATGTG AAGCCTACTC GAAAGGGCAA ATACGCTAAA
GCGAAAAAAT GA
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| Protein sequence | MSFTSLGLPP LLLDAVNQSG YQTATPVQQA VIPLALDGRD VLASAETGTG KTAAFALPLL
SHLMNQDHSD LLPANRLRAL IMTPTRELAI QIEQNLVKYS QFINLTSLAV YGGASINPQR
KALEQGIDIL VATPGRLFDI IGQHELDLSF VTHLVIDEAD RMLDLGFVKD IEKVKRLIAR
QHQTMMFSAT FSEDVKTLAA KMLNNPEYVH VETQTTAANV VQQVYQVDTR RKAELLSELI
GKHNWQQVMV FTSRKETADH LYRELSLDGI KSSVFHGDKS QGARNRALEE FKTGQLRVLI
ATDLAARGLD IQALPRVINF ELPEECEDYI HRIGRTGRAG LGGEAISLVS PQELELLGAI
EQLIEQSLPI LVPTGYEEGA PLPARYRDVA AEKPKKVLKY KRGKPSQTDV KPTRKGKYAK
AKK
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