| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2744 |
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| Symbol | |
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| ID | 4279650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3298451 |
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| End bp | 3300241 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638135563 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_751423 |
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| Protein GI | 114563909 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTATTT ACCAAGCCCC TCTTCGCGAT TATCAATTCA TTCTGTCTGA ACTGCTTAAT
GTCTATAAAC AAACTGATTT ACGCGGTTTT GATGAAATAG ATGCGGATCT CACTGATGCA
ATTTTGCAAG GTGTTGCCGA TTTCAGCACC GACATCATGT TGCCACTCAA TGCCAGCGGT
GACTTAGAAG GTTGTAAACT GGTTGATGGT AAGGTCATTA CCCCTATTGG GTTCAAGCAA
GCTTATAAAC AATACGTACA AGATGGTTGG GCAACATTAA CCTGTGATCC TGAATTTGGT
GGCCAAGGTT TACCTGAAGT TATCGGTACA TTCGCAACCG AAATGAAAAC CGCCACTAAT
ATGGCGTTTG CCATGTATCC AGGCTTAACC CATGGCGCTT ATTCAGCCAT TCATGTTCAC
GGCAGTGATG CGCTAAAGCA AAAGTACTTA GCAAAACTGG TCAGTGGCGA GTGGACTGGT
ACCATGAACT TAACCGAGTC TCATGCGGGT ACAGATTTAG CCTTATTACG TACTAAAGCG
GTTCCTGCGG GTGACGATGT ATTTGCCATT AGCGGCGAAA AAATCTTTAT CTCGTCTGGC
GATCACGATC TCGCCGACAA CATCATTCAT TTAGTATTAG CGCGTTTACC TGATGCACCG
GAAGGTGTTA AAGGTATTTC ACTATTTGCT GTACCTAAGT TTTTAGTCAA TGCCGATGGT
AGCTTAGGCG AAGCTAACAA GCTTAGCGCA ACAGGTCTTG AGCATAAGAT GGGTATTCAT
GGTAACTCAA CATGTGTGAT GCATTTTGAC GGCGCCATAG GTGAGCTTGT TGGTGCAGCA
CATCAAGGTC TAAAAGCCAT GTTTACCATG ATGAACCAAG CACGTTTAGG TGTGGGTATT
CAAGGTTTAG GCGTATCAGA TATTGCTTAT CAAAATGCTC TCGTTTATGC CAAAGAGCGT
ATTCAAGGCC GTGCATTAAG TGGCGTTAAG CAGCCTGAAC AAGCTGCTGA CTCATTATTA
GTCCATGGCG ATGTACGTCG TATGCTGTTA TCACAAAAGT CGTTCAATGA AGGTACACGT
GCGTTAATGG GTCAACAAGC ACTGTGGCTT GACCAAGTAG AACGTCATAC CGATCCAGAA
AAAGCCAAAC AAGCTAATGC ACTTGCGGCA TTATTTACAC CAATTGTTAA AGGCTTTGTC
ACCGACCAAG GCTTTAAAGC GTGTGTTGAT GCCCAGCAAA TCTATGGTGG TCATGGTTAT
ATTAATGAAT GGGGTATGGA ACAGTTTGTA CGTGATATCC GTATTGCAAT GATTTACGAA
GGCACAAATG GAGTGCAAGC ACTCGATTTA GTCGGCCGCA AATTACTTGC CGACAAAGGT
GCAGCATTAA CCCTGTGGTC AGTTATGGTG AAGGAATTAA TTCAGCAAAA CGTTGGTAAT
GACGCAATGA AACCTTATCT TGCAGGCTTA ATGGATGCAG CTGGCGATCT TGAAAAAGCC
ACCGGTTTTA TTGTGCAGTC AGCCAGTAAG AATCCTGATC TTATTGGTGC AGCGTCAATG
GCCTATATGC AGTTGTTTGG TATTACAGCG CTAGCGTGGA TGTGGACTCG CGTTGCGGCA
ACATCATTAG CCGCATTAGA AGCAGGTACT GAAGAGACTG GTTTTTACCA AGCTAAACTT
AAAACCGCAC AATTCTTTAT GAGCTATTGG GGCAGCCAAA CCCGCAGTTT ACGCAAACAA
ATTGAATCTA GTAGCGCTGA TATTGTTGAT TTCGCAGAAG CTGATTTTTA A
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| Protein sequence | MPIYQAPLRD YQFILSELLN VYKQTDLRGF DEIDADLTDA ILQGVADFST DIMLPLNASG
DLEGCKLVDG KVITPIGFKQ AYKQYVQDGW ATLTCDPEFG GQGLPEVIGT FATEMKTATN
MAFAMYPGLT HGAYSAIHVH GSDALKQKYL AKLVSGEWTG TMNLTESHAG TDLALLRTKA
VPAGDDVFAI SGEKIFISSG DHDLADNIIH LVLARLPDAP EGVKGISLFA VPKFLVNADG
SLGEANKLSA TGLEHKMGIH GNSTCVMHFD GAIGELVGAA HQGLKAMFTM MNQARLGVGI
QGLGVSDIAY QNALVYAKER IQGRALSGVK QPEQAADSLL VHGDVRRMLL SQKSFNEGTR
ALMGQQALWL DQVERHTDPE KAKQANALAA LFTPIVKGFV TDQGFKACVD AQQIYGGHGY
INEWGMEQFV RDIRIAMIYE GTNGVQALDL VGRKLLADKG AALTLWSVMV KELIQQNVGN
DAMKPYLAGL MDAAGDLEKA TGFIVQSASK NPDLIGAASM AYMQLFGITA LAWMWTRVAA
TSLAALEAGT EETGFYQAKL KTAQFFMSYW GSQTRSLRKQ IESSSADIVD FAEADF
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