Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2741 |
Symbol | |
ID | 4279647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 3293681 |
End bp | 3295129 |
Gene Length | 1449 bp |
Protein Length | 482 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638135560 |
Product | NADH dehydrogenase (quinone) |
Protein accession | YP_751420 |
Protein GI | 114563906 |
COG category | [C] Energy production and conversion [P] Inorganic ion transport and metabolism |
COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.405496 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGTTAA TTTTGGAGCA AATCCCGTGG ATTGTGATGC CGATCATCTT CCCCTTGATA GGGAGTATGG CTTGCTTCCT GTTTCCGGCA AAAGCGAAGT CACTGGGTCT GCTGACTTCC TTGGTTGTTT TGGCATGTGT CACTAGGCTC GGCTGGCAAC TCAAAGCACT AGGATCGCTG CGCTACCCTA TGGGTGGTTG GGGGGCGCCA TTGGGCATCG ACCTTTACGC AGATGGTCTG AGTCTACTAA TGCTATTGAT GGCGGCACTG GTAGGTTTAG GTATCAGCAT CTATTCCAGC AGTTATTTCA GTCGCGACAA AGCGAGGCAT TTTTGGCCGT TGTGGTTATT CCTGTGCGGG GCGCTCAATG CATTGTTTCT GTCAGCAGAT ATCTTCAATC TCTATGTCAC ACTGGAATTA CTGGGATTAA CGGCAGTGGC CCTTGTGGCA TTAGCAGGTG GCGCCGACGC CTTGATTGCA GCAATGCGTT ATCTATTGGT AAGCCTACTG GGCTCCTTGT TCTATCTGTT GGGCGTTGCC CTTATCTACC ACAGTGTTGG TAGTCTGGAC ATTGCAATAC TAGCACAACG AGTAGAACCG TCACCTGCGA TGTGGGCGGC GGTGGGATTG ATAAGTACCG GCCTACTGCT CAAAACAGCG CTTTTCCCAA TGCATTTTTG GTTACCGCCC GCCCATGCTT CAGCCCCAGC CCCCGTGAGT GCGCTTATGT CCGCATTGGT GGTCAAAGCT TCCTTCTATA TTCTGCTACG CATGTGGCTG GAGTTCTTTC AAACGCAGGG GGGGGCATTT GCTAATTTTC TCGGACTGCT CGGCGCCGCG GCCGTCCTTT GGGGCGGAAT TCAAGCACTG CGCCAAACAC GGCTAAAATT ACTTATTGCC TACTCGACAG TATCGCAACT GGGCTATCTG TTTTTGGCTT TTCCGTTGGG GACGAGCATT GCCTGGAAGG GAGCACTATA TATGTTATTT TCCCATGCTA TGGCTAAGGC GGCGATGTTC ATGGCGGCGG GTAATATTCA GTTTTTTGCG GGACATGACC GCATAGCGGA GCTCGGCTCA ATAACCCAAC GTCTGCCACT GACATTGACG GCATTCGCCC TAGCTGGTAT CAGCCTTATG GGGCTACCGC CAAGTGGAGG GTTCATTGGC AAGTGGTTAT TACTGCAGGC ATCAATAGAA TCCGGACAGT GGTGGTGGGG AATTATTCTG CTCCTTGGTG GATTTCTGGC CACTGGCTAT GTATTCAAAG TCATTGCTCA TGTGTTTACT CATGACGAAC CAACAAGCCG AACGGTAACA CTACCGGCCA CGATGGAGTG GAGCGCTTTA GGGTTGGCTT TAATAGCAGT GCTCTTGGGC TTGTTCACAT ACTGGCCGTT GGCAATGTTA GAAATGGGTT CCCCCTTTGG CACAGGACAT AGCGGATGA
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Protein sequence | MELILEQIPW IVMPIIFPLI GSMACFLFPA KAKSLGLLTS LVVLACVTRL GWQLKALGSL RYPMGGWGAP LGIDLYADGL SLLMLLMAAL VGLGISIYSS SYFSRDKARH FWPLWLFLCG ALNALFLSAD IFNLYVTLEL LGLTAVALVA LAGGADALIA AMRYLLVSLL GSLFYLLGVA LIYHSVGSLD IAILAQRVEP SPAMWAAVGL ISTGLLLKTA LFPMHFWLPP AHASAPAPVS ALMSALVVKA SFYILLRMWL EFFQTQGGAF ANFLGLLGAA AVLWGGIQAL RQTRLKLLIA YSTVSQLGYL FLAFPLGTSI AWKGALYMLF SHAMAKAAMF MAAGNIQFFA GHDRIAELGS ITQRLPLTLT AFALAGISLM GLPPSGGFIG KWLLLQASIE SGQWWWGIIL LLGGFLATGY VFKVIAHVFT HDEPTSRTVT LPATMEWSAL GLALIAVLLG LFTYWPLAML EMGSPFGTGH SG
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