Gene Sfri_2739 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2739 
Symbol 
ID4279645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp3292427 
End bp3293083 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content52% 
IMG OID638135558 
Producthypothetical protein 
Protein accessionYP_751418 
Protein GI114563904 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.137435 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATACAA GACCTTGGTT ATTGTTGCCA CTATTGCTGG TGCTCGGTGT TGTACTCAGT 
TATGCCGTAT TGTCTATACC TGATCCTGCG CAAGAGCTGC CAACAATGCT GACCGACAAC 
ATGACGATAA GTGGCGCACA CAATCCTGTG AGTGCGGTGC TGCTAAACTT TCGTGGTTAC 
GATACTTTGC TGGAGATGGG AGTCTTACTG GCAGCTCTAC TTGGCGTATG GTCTCTGGAC 
GAAATGCCCA CTTATCGCGG ATCAGCCCCG GACCAGATTC TGGACATCAT GTCTCGTCAG 
CTGATTCCCG TGTTTATTTT GGTGGCCGGT TACTTAGTGT GGGCAGGAGC TGATGCACCG 
GGGGGAGCTT TTCAGGCCGG TGCTTTACTG GGTGCGGCAG GTGTACTGCT ACGGCTTTGC 
GGATGGCGGG TAAACAATCG TTACTCAGGC CTTCCGTTGA GAGTGCTATT AGTCTTGGGT 
CTAGCTATGT TTGTCATGGT AGGTACGGGG GCGTTGCTGA TCGGAAGTGA ATTTTTGCGA 
TACCCTCCTA CTGTGGCCAG TGAGCTGATG TTGATTATCG AATCTGCAGC TACCCTCTCC 
ATTGGCGCAA CATTGGCAGC GCTCTTCCTC GGTGGACGGC CAAAGGGAGA AGAATAA
 
Protein sequence
MDTRPWLLLP LLLVLGVVLS YAVLSIPDPA QELPTMLTDN MTISGAHNPV SAVLLNFRGY 
DTLLEMGVLL AALLGVWSLD EMPTYRGSAP DQILDIMSRQ LIPVFILVAG YLVWAGADAP 
GGAFQAGALL GAAGVLLRLC GWRVNNRYSG LPLRVLLVLG LAMFVMVGTG ALLIGSEFLR 
YPPTVASELM LIIESAATLS IGATLAALFL GGRPKGEE