| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2732 |
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| Symbol | |
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| ID | 4279638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3287013 |
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| End bp | 3287717 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638135551 |
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| Product | 3-oxoacid CoA-transferase, A subunit |
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| Protein accession | YP_751411 |
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| Protein GI | 114563897 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
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| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAGGAT TCAATAAAGT CGTCCACAGC TATGACGAAG CACTAGCAGG ACTGAATGAC
AACATGACCA TTATGGTCGG CGGGTTTGGT TTGTGTGGTA TCCCTGAAGG CTTAATTAAC
CACATGGTTA AAATTGGCGT TAAAGGCTTA ACGGCCATAT CAAACAACGC CGGCGTTGAT
GACTTTGGCT TAGGGCTATT ACTAAAGCAG CATCAAATTG CCACCATGAT TGCATCATAT
GTTGGAGAAA ATGCCACCTT TGAACAGCAA ATGTTGTCAG GTGAACTCAA TGTTATTTTA
ACCCCGCAAG GCACATTGGC TGAAAAAATT CGTGCTGGCG GCGCGGGTAT TCCGGCATTT
TTCACCGCGA CAGGTTACGG AACGCCGATT GCTGACGGAA AAGAAACCCG TGAAATTAAA
GGTCGTCATT ACGTATTAGA AGAATCATTA ACGGCAGATT TTGCCTTAGT TCGCGCCTGG
AAAGCCGACA CCATGGGTAA TTTGGTGTTT CGCAAAACCG CCGCTAACTT CAATCCAATG
ATGGCCACCG CAGGTAAAAT TACCGTGGTT GAAGCTGAAG AGATTGTTGA ACCAGGTGAG
TTAGATCCAA ACCATATTCA TACACCGGGT ATATATGTTG ATCGCGTTAT CAAAGCCAGC
TTTGAGAAAC GAATTGAGCA ACGTACCGTC AAAGCTGCGA AATAA
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| Protein sequence | MAGFNKVVHS YDEALAGLND NMTIMVGGFG LCGIPEGLIN HMVKIGVKGL TAISNNAGVD
DFGLGLLLKQ HQIATMIASY VGENATFEQQ MLSGELNVIL TPQGTLAEKI RAGGAGIPAF
FTATGYGTPI ADGKETREIK GRHYVLEESL TADFALVRAW KADTMGNLVF RKTAANFNPM
MATAGKITVV EAEEIVEPGE LDPNHIHTPG IYVDRVIKAS FEKRIEQRTV KAAK
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