| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2720 |
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| Symbol | |
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| ID | 4279626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3271971 |
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| End bp | 3273206 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638135539 |
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| Product | major facilitator transporter |
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| Protein accession | YP_751399 |
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| Protein GI | 114563885 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGAGT TATCTCAGAC TTATCGTTCG CATGCGCAAA CTCGTTTAAT TTGGGCCTTG
TGCATCGCTT CTATGGTGAT TTACATTAAT TTGTACACAG TACAAGGCAT GCTGCCGTCT
ATAGCGGAAC ATTTTGATGT GTCTGGCGCA CAAGCTACTT TGGTGTTATC GGTTACCAGT
TTTACCTTAG CTTTTTCATT ACTTTTTTAT GCGGTTTTAT CTGACCGGAT AGGACGGTTG
GCCCCTATTG TGGTGAGTTT ATGGTTACTT GCTGCATCTA ATATATTGTT GATTTTTGCT
CAGACTTTTG ATGACTTACT TTGGGTTCGT TTACTTCAAG GTATTTTGCT TGCTGCTGTT
CCTGCGATTT CGATGGCCTA TTTTAAAGAG CAATTGGCTC CTTCCTTTAT GCTAAAAGCT
GCTGCCGTAT ACATTATGGC CAACAGTATG GGCGGCATCG CAGGACGAAT TTTCGGTGGG
TTAATGGCCC AAAATTTATC GTGGCAGTCG TCTATGGGGT TGATATTTTT GGTAACGTTA
ATGGGAGTGG CATTGGTAAC GTATTTATTG CCGCGTAAAG AAATTAAGCC CCCAGTGGTA
AAGCAAAAAG TCTCTTTGAT GCATAAAGTA AAGCAAGACA TCGATGGCTT TATGTTCCAT
TTGTCAGACT CGCAGATGCG CCTTGCTTAT GCCATTGGTG GCTTAGCATT TATGATGATG
GTTAATCAAT TTAGCTTTAT TCAATTGCAT ATTATGGCTG AACCTTATGG TTTAAGTCGC
TTTAATGCAA CCTTGATTTT TCTATGTTAT TCAAGTGGCA CCTTCGCTTC TTATTTGTCG
GCAAAATGGA TTATGCGCTA TGGCTCGATG CCATTATTTA GGGTGGCGTT ATGCTTGATG
GTCGCTGGCA CGTTGTTGAC CTTAGTGGAT ACATTGACTG CTATTGTGGT GGGCTTTTTG
ATCAGTGCTT GCGGATTTTT CTTAACTCAT AGCTGTTGCA ATTCGTTTGT TGCTATCCGT
GCAACCAGTC ATCGTGCTAA GGCAACATCG CTGTATTTAT GTTGCTACTA TCTTGGTGCA
TCTCTGGGAG GGCCTTATTT AATGCTATTT TGGCACGAAG CAGAATGGAA TGGAGTGGTT
GTCGGATCGA TGAGCCTTTT GACACTGCTT TTAGTGGCTA TATGGCGTTT AGGGATACAT
CAACAACAGG TTATTGATGT ATCCAAAGCG AGTTAG
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| Protein sequence | MTELSQTYRS HAQTRLIWAL CIASMVIYIN LYTVQGMLPS IAEHFDVSGA QATLVLSVTS
FTLAFSLLFY AVLSDRIGRL APIVVSLWLL AASNILLIFA QTFDDLLWVR LLQGILLAAV
PAISMAYFKE QLAPSFMLKA AAVYIMANSM GGIAGRIFGG LMAQNLSWQS SMGLIFLVTL
MGVALVTYLL PRKEIKPPVV KQKVSLMHKV KQDIDGFMFH LSDSQMRLAY AIGGLAFMMM
VNQFSFIQLH IMAEPYGLSR FNATLIFLCY SSGTFASYLS AKWIMRYGSM PLFRVALCLM
VAGTLLTLVD TLTAIVVGFL ISACGFFLTH SCCNSFVAIR ATSHRAKATS LYLCCYYLGA
SLGGPYLMLF WHEAEWNGVV VGSMSLLTLL LVAIWRLGIH QQQVIDVSKA S
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