| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2705 |
|---|
| Symbol | |
|---|
| ID | 4279611 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | + |
|---|
| Start bp | 3249793 |
|---|
| End bp | 3250374 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 638135510 |
|---|
| Product | redoxin domain-containing protein |
|---|
| Protein accession | YP_751384 |
|---|
| Protein GI | 114563870 |
|---|
| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00254505 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTCAT GGTTACTTAA TCTAAAATAC ACACTCAAAA CCAAACGATT TTGGCTAACG
AGTCTACGCG ATATCATCGT TATTGCGGTG GTGTTGTTCG CTATCGCGAA TTATCTACAG
CGAGATATGC GAACAGGCGT AGCTATGCCA ATTAACGCGT ATACTATCGC CAATAAACCA
ATATCATTAT TTACTGCACC ATCAATTAAC GCCCAGCAAC ATATTAGAGA GAACAGTACC
CAACATAAAC CCACCTTGGT CTATTTTTGG GGCACTTGGT GTCCGGTGTG TAAAGTGACA
TCTCCTATGG TGAACTCAGT TAGTCTGAAT CCAGATTATC AGGTTGTTTC CATTGCAGTA
GCTTCAGGTT CTGACGACGA CATCAGCACC TTTATGCAAC ATCATCATTA TCATTTTGAT
GTCATCAATC AGCATCAAAC AATGTTATTA AGCCAACAAT GGGGCGCCAT GGCATTGCCT
GCTATTTATA TCGTTGATGC TGAAAACAAT ATTCGCTTTG TTACCTCTGG CGTAACAAGC
AGTTGGGGAA TGTCATTACG GTTGTGGCTA GCGACCTGGT AA
|
|---|
| Protein sequence | MPSWLLNLKY TLKTKRFWLT SLRDIIVIAV VLFAIANYLQ RDMRTGVAMP INAYTIANKP
ISLFTAPSIN AQQHIRENST QHKPTLVYFW GTWCPVCKVT SPMVNSVSLN PDYQVVSIAV
ASGSDDDIST FMQHHHYHFD VINQHQTMLL SQQWGAMALP AIYIVDAENN IRFVTSGVTS
SWGMSLRLWL ATW
|
|---|
| |