| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2658 |
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| Symbol | |
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| ID | 4279565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3190929 |
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| End bp | 3192818 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638135458 |
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| Product | hypothetical protein |
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| Protein accession | YP_751337 |
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| Protein GI | 114563824 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.142144 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTAA AGTTTGATAA AGCCTTATCC CTTGTTGCGA TAGGTGTATT AAGTGTGATT
GGAACAGTTC AAGCTGCGCC AGTATATGAA ATTGTTAATA TTGAAGATTT CGACCTAAAT
GGCACTATTG ACGGTACACG TAATGGCTAT GCCATGGCGG TGAACAGTCA AGATGAAGTT
GTCGGTATTT CAAAAGGTAA AAAGAAACTT AGCACCGAAG ACATTGAAGG CGGCATCATT
GATGTTGAAG ATGGTATTTC TGATGCAGAA GAAATTACCT ATTCAGTATT AACACCAATA
GAAGCAAATA ACTTCACCGT CACGACTAGT GCGAATGCCG CTGAAGGTGC TTGGAAGCCT
TCATTTTATA GCTTAGCCGG CACGACTAAT CCTACTGACG TAGACAGTGA TGGTGAACTT
GTTGTTAATT CAATTGATAC TTTCTTCTAT GGTCTTAACA GTAATGGCAC CAAAGTAGGT
GCTTATACTG GTGAGCAAAA GACCTTGGCT TATGAAGGTA CAAGCACAAC ACAAGAGCTT
TGGTATTATC GTGACTTTGA ACTTCGTGCC ATTGCAGTAA AAGATGATGT CGAATTTTCA
TTAGTACCTC CTTACACAAC CTATGTTCGT GAACAAGATG CTGATACTAG TGCTGCTACC
GTTGAGTTAG GTGGTTCGTC TGTTGCTGCC GATGTAAATG AAAATAACCT TGTTGTTGGT
TATGGTAGTA CTGCGCTGTC GTCATCGAGT GTTGACCGTG TAGATAGCTG TATTAAAAGC
GCAGAAGACA CTGATGCAGA TAATCCTACG CCGCTCGCTA TTTGTGTTCA AGATTCTCAG
TATCCAGACA CTAACAGCCG TCGTTATATT ATTTATCAAA CACGCGCTTT AGTATGGGAT
TTAAATAACA TAGACGATGC CGGTGTACCT GAGCGTACTG AATTACCGTT AGGCTTAACC
CCTGCAACTG ACTCAACGTT AATTTACACC GCCCAAGCAT TAGGTGTTAA CGGCAATGAT
GATGTCGCTG GCCGGTCACA TGTTTATCGT AACGGTGACA CCGATAAATT ATATTTTGAT
GCGGCTTACT GGAAAAAGAA TGTCAGTGGT GAATATCAAT ATAATTGGGT AGATATGGAG
AATGAAGTCA CTAGCTCTAT CGCATATGAT ATTAATGATA ATGGTATTTT AGTCGGCAGT
TATCGTAAAT ATATTGGTGG CTATTTGCGT GATAAATTCT TCACATTAGA CACTAACAAT
CCAGAACAAG GGATTGTTAC GCCGAATGAC TTCCAAACCA CATTGTCAGA TTTAAGTAGC
AAACCTAAAG ATATCAACAA TAAAGGACAA GTTGTCGGTT ATGTTGAATC AACTTACGAC
AAAGAAAAGC CTCGTCCAAA AGTGGGTTTC TTATTTGAAA ATAGTACTAG CGAATTTTCT
AATTTAAACG ATCTCCTTAC CTGTGGTTCT AAAGGCTATG TACAGAATAC TGATGGAGAG
TGGGCTCGTC ATCAAGTGAG TATTCAAGAT GGTACTGGTG AAATATTAAC TTATAACACC
GATATTCAAG TTGTAGAAGC CAATAGCATT AATGAAGACG GTACGATTGT AGGGACTGCA
TTTATTCGTA AGCCACAATA TCAAACCGAT GCAACTACTG GTAATGTGCT TGTCGGTGAA
AATAACCTAC CGCTATTTGA ACTAGACGGA AACGGTGCTC CAGTAACTGC ATATTTGCCG
CGAATGGTTA TTTTGAAACC AACCGCTGGT GAAGCATGTA CTACTTCAGA CACAGTTGAA
GAAGAGGCTT ATGAGCGTAA AGGTGCAGCC AGTTTTGCTT GGTTATTCAC TCTGCCATTA
TTATGGTTGC GTCGCCGAGT AAAAAAATAG
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| Protein sequence | MKLKFDKALS LVAIGVLSVI GTVQAAPVYE IVNIEDFDLN GTIDGTRNGY AMAVNSQDEV
VGISKGKKKL STEDIEGGII DVEDGISDAE EITYSVLTPI EANNFTVTTS ANAAEGAWKP
SFYSLAGTTN PTDVDSDGEL VVNSIDTFFY GLNSNGTKVG AYTGEQKTLA YEGTSTTQEL
WYYRDFELRA IAVKDDVEFS LVPPYTTYVR EQDADTSAAT VELGGSSVAA DVNENNLVVG
YGSTALSSSS VDRVDSCIKS AEDTDADNPT PLAICVQDSQ YPDTNSRRYI IYQTRALVWD
LNNIDDAGVP ERTELPLGLT PATDSTLIYT AQALGVNGND DVAGRSHVYR NGDTDKLYFD
AAYWKKNVSG EYQYNWVDME NEVTSSIAYD INDNGILVGS YRKYIGGYLR DKFFTLDTNN
PEQGIVTPND FQTTLSDLSS KPKDINNKGQ VVGYVESTYD KEKPRPKVGF LFENSTSEFS
NLNDLLTCGS KGYVQNTDGE WARHQVSIQD GTGEILTYNT DIQVVEANSI NEDGTIVGTA
FIRKPQYQTD ATTGNVLVGE NNLPLFELDG NGAPVTAYLP RMVILKPTAG EACTTSDTVE
EEAYERKGAA SFAWLFTLPL LWLRRRVKK
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