| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2651 |
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| Symbol | |
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| ID | 4279558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3179103 |
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| End bp | 3180938 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638135450 |
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| Product | PKD domain-containing protein |
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| Protein accession | YP_751330 |
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| Protein GI | 114563817 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAATTAC ATAGGATAGT AACATTAACC ACATTACTGG GTTTAACAGC ATGTGGTGGT
GGAAATGACA GTAGCTCAGA TCAAGCCCCA TTGACACCGC CCCCGCCTCC GCCGGAAAAT
ATTATTCCGG TTGCTAACAT TGCCTCTCTT TCATCAGTAA TTTCTTTGAC CGAAGTACAA
TTAAATGGCA GTGCCAGCGT GGATTCCGAT GGCCAAATCC AAAGCTATCA ATGGCTACAA
ATTGACAATG GCGCGCCCAC GGTTGCGCTT TCTGATGCTA CGCAATCTGT AACAGGCTTT
ATTGCACCTG AAGTACAACA AGATACCGAA TTTAGTTTCC AACTGACTGT TACCGATAAT
GAAGGTGCAA CAAACAGCGT TGAAACCCGA CTAACTGTAT TACCTATCCC TTTACAACAA
GGGCATCAGG GGAGAGTGAT TGATGGGTAT TTAATGGGTG CTACGGTATG GTTAGATATT
AACAATAACG GTGTGTTTGA TGAAGATGAG CCAAATGATG TCACCGATGC CGGCGGAGAG
TATTCGTTGA AATATAATGC CGAGCAACAA GTTTGTGCCA CTTTAGTACC GGTAAGAGTA
GATGTTCCTG TTGGCGCAAT TGATGAAACC GAAGGCGTGG TTACCTCTGC TTATCAACTT
ATTTATCCTC CGCTTTATGG ACAGTTTAAT CCTGAACAAG CCGCATATAT TACGCCATTA
ACGTCGGCAG TTTGGGACAT GTTATCTTCA TCTCCTACGG TTAACAGTAC AAACGCAATG
GATAGAAATG CCGAGGTTCT TCAAGCTAGT TGTCAACAGC TCATTGACAA TCCTCAAAGC
CAACTGAATT ATGCTTCGCT TATTAATGAA GCCATTGATG ATTTTACTCG AAAATCTAAC
ATATCGATTG ATGATCTATT CAGCGACTTT ATTGAAAATG GGAATCAAGC ATTGCAACAG
ACGGCGCGCC GTTATGTGAC GGGGTTAAGC TTAAGTTTGA AGAAGAAAGC TGAACTGTTA
ACTAATGATG CCTACAAGGA CGCGAGTTAT ATCCGAGTTA TTCATTATCT AGATAAAGCA
CCTGCAGCAG AACAGCTTAC TGAAAATGTC TGGTACCGAG ATATCGTTGT TTTCTACCCT
GACGATAGTC AATTTTTCTC AGAGTCGGCA AGAATGATAA GCGATGATAA TGGCGACGTA
ACTGATGCCG TTCTATATGT CTATTATCGC CGTCATAATA ACGCATTTTC ATGGGGTGAT
AATGGCAGGT ACATCGCTAG TTATGATGAG CGAAATACCG CTAATGGTCA GTTAGAGACT
TGTTTTAATA ACGAAAGTAT TATGGTTACT CATGACGTCG AACTCGTACC GGTACAATTT
ACACTAAGCA ATACCTACTC AACAGATACT GGTGAGTGTC AATTCACGGC CGATATTTTT
ACTCAAGCTT ATGAGCGTGT TTATTACGTT GATTATAGCG AAAACAATAT TAATTATCTT
ATGCAGTTTT CACAATTTAA AACTAATGGG GCGTTTGCAA CGCTTAATGA TTGGGTTAAT
TTACAAGACC GTTCTGCAGA ATATTCAACC ACAGAGTTAG TCACTTTATT AACTGATTAT
GGTTATACAT TTACAGATGA TACTGGTTTA CAGGATGCTG ACTTTAGCTG GTACAAACGT
AAAACTGACG ACTCTCAAGA ACATAGGGTA ACCACCGAGA AAAACTATGA TGCAAGTACT
GGGATGATTA GTTGGACCCA GTTAACTGAG CAAAGTAATA ATACTAATAT TAAGCAGTGC
AGTAAGGATG GTATTACTTG GGGAGCATGT ACGTAG
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| Protein sequence | MKLHRIVTLT TLLGLTACGG GNDSSSDQAP LTPPPPPPEN IIPVANIASL SSVISLTEVQ
LNGSASVDSD GQIQSYQWLQ IDNGAPTVAL SDATQSVTGF IAPEVQQDTE FSFQLTVTDN
EGATNSVETR LTVLPIPLQQ GHQGRVIDGY LMGATVWLDI NNNGVFDEDE PNDVTDAGGE
YSLKYNAEQQ VCATLVPVRV DVPVGAIDET EGVVTSAYQL IYPPLYGQFN PEQAAYITPL
TSAVWDMLSS SPTVNSTNAM DRNAEVLQAS CQQLIDNPQS QLNYASLINE AIDDFTRKSN
ISIDDLFSDF IENGNQALQQ TARRYVTGLS LSLKKKAELL TNDAYKDASY IRVIHYLDKA
PAAEQLTENV WYRDIVVFYP DDSQFFSESA RMISDDNGDV TDAVLYVYYR RHNNAFSWGD
NGRYIASYDE RNTANGQLET CFNNESIMVT HDVELVPVQF TLSNTYSTDT GECQFTADIF
TQAYERVYYV DYSENNINYL MQFSQFKTNG AFATLNDWVN LQDRSAEYST TELVTLLTDY
GYTFTDDTGL QDADFSWYKR KTDDSQEHRV TTEKNYDAST GMISWTQLTE QSNNTNIKQC
SKDGITWGAC T
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