| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2639 |
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| Symbol | |
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| ID | 4279546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3160933 |
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| End bp | 3163020 |
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| Gene Length | 2088 bp |
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| Protein Length | 695 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638135435 |
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| Product | outer membrane protein precursor MtrB |
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| Protein accession | YP_751318 |
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| Protein GI | 114563805 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR03509] decaheme-associated outer membrane protein, MtrB/PioB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.381518 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACTA AATTGAACCT CATTACCTTA GCGTTACTCA CTAGTACCAG CTTTAGCCTG
ATGGCTGATG GTTATGGCCT AGCCAATGCT AAAACCGACA ACATTAAATA TGATGCTTGG
AATTGTAAGG CTTGTGCTGT CGAAACTGGT ACCACTGGAA ATGTCGGTGT CGGTATTGGT
TACAACAGCG AAGACGATAT TAACTCAGCT AACGCCTTTA ATAGCAGTAA TCAAACTGCT
GGCAAAATTG ATGCCGATAT AAAGTATCGC GGTAACAATG GCTACCAAGC AAAAGTCGTC
GCAAATAATA TCGGCATGAA CAATGGCCGT ATGGAAATAG ATGTCGGTAA ACTTGGATTG
TATCGTCTTA ATCTAGGCTA TCGCTCCATT GCGACGTATC AAAGCAACAA TGCATTAAGC
CCTTATCAGA ATATCGGCAG CGATAATCTT ACTTTAGCGG ATAATTGGGT AACGGCAGGT
TCAAGCTCAG ATATGCCAAT GCTTTATAGC AGTTTAACCC CATTTGAATT GTCGCTTAAA
CGTGAACGTG CCGGTCTTGG GTTTGAATAT CAAACAGAAT CACTGTTCAC AACCTACGTT
AATTTTCAAC GTGAAGAGAA AACCGGAACC AAAGTTGCTT CTGGCAGTTT CTTCAACCAA
TCAATGATGT TGGCAGAGCC TGTTGATTAC ACGACAGACA TCTTAAACGC TGGGATTAAA
CTCCGTGGTG ATAACTGGTT TACTAGCATA AACTACAATG GTTCAGTGTT TAGCAATAAC
AATCAACAGC TTGGCTTTGA CAGTGCCTTT AACCCTACGT TTGGGGCGCA AAGTCGTGGT
TACATGGCGC TAGACCCAGA TAACGAGGCC CATACTATTT CACTAATGGG CCAATATAAT
GATTCCATTA CCAGCTTAAG TGGTCGTTTG CTCTTGGGCC AAATGACTCA AGATCAGCAA
TTAACTAGCA TAGGTTATGG TTATTCATTA CCGGCAGATT CTATAGATGC GAAAGTTGAT
ATCACCGGCA TGACACTTAA AGCGGTGACC AAGCTGAACC GAGCATGGCG TCTCACTGGC
AGTTATGATT ATAACGACAG AGAAAACAAC ACCCAAATCG AACAATGGAC CCAAATTAGT
ATTAACGATG TTACTGGCAA AGTGCGGTAC AACACCCCAT ACGATCTCAC TACCCATAAC
GCTAAATTAT CAACTGACTA TCGAATCAAT CATGGTTTAA AACTCGATGC GGGTTATGAT
TTCAAACGAG ATGAACGCAG TAATCAAGGT AGAGAAACCA CTGACGATAA TAACGTCTGG
GCACGTTTAC GGGTCAATAG TTTTGACATG TGGGATATGT GGCTTAAAGG TAGTTTGAGC
AAGAGAGATG GTTCAGAATA TAAAGCATCA GAATCGTCAT CTGCAGAACA AAATCCGTTG
CTACGTCGAT ACTATTTGGC CGACCGTGAC CGCACTCAAA TAGAGGCGCG CTTTAACCAT
AGTCCACTTG ATAACTTGAA CGTCGATTTT GGGGTTCGCT ATGCATTGGA TGACTATACA
AATACGCAAA TAGGCTTAAC TGAATCAAAA GACACAAACT ACGATATTAA TCTGAGCTAC
ATGATTAATG ACGATATGAA TGTTAATACA TTTTATAATC ATCAAATCAT CAAGTCCGCT
CAATCTGGCA GTGCCAATTT AAGTATAGCG ACTTGGCAAG CCGATATTGA AGACACTGTC
GATGTTGTTG GCGCAGGCTT AAGCTACAAC AATTTAATGG ACAGTCGTTT GCGCTTAGGT
TTGGATTATA CCTACTCAGA CTCAGACAGT AATACCCAAG TAAGACAAGG TATTAGTGGC
GATTACGGTG ACTATTTTGC CAAAGTGCAT AACATTAATG TGTATGCACA ATATCAAGCC
ACCGAAAAAA TGGCCTTGCG TATAGACTAC AAAATGGAAA AATATCTTGA TAATGATGAC
GCCAATGATA TTGAGCCAGA TACCATTTGG AATGTCATGA GTTTTGGCAA TTTACAGCAT
GACTACACGG CACACATGAT CATGCTCAAC GTAAATTATA GTCTGTAA
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| Protein sequence | MNTKLNLITL ALLTSTSFSL MADGYGLANA KTDNIKYDAW NCKACAVETG TTGNVGVGIG
YNSEDDINSA NAFNSSNQTA GKIDADIKYR GNNGYQAKVV ANNIGMNNGR MEIDVGKLGL
YRLNLGYRSI ATYQSNNALS PYQNIGSDNL TLADNWVTAG SSSDMPMLYS SLTPFELSLK
RERAGLGFEY QTESLFTTYV NFQREEKTGT KVASGSFFNQ SMMLAEPVDY TTDILNAGIK
LRGDNWFTSI NYNGSVFSNN NQQLGFDSAF NPTFGAQSRG YMALDPDNEA HTISLMGQYN
DSITSLSGRL LLGQMTQDQQ LTSIGYGYSL PADSIDAKVD ITGMTLKAVT KLNRAWRLTG
SYDYNDRENN TQIEQWTQIS INDVTGKVRY NTPYDLTTHN AKLSTDYRIN HGLKLDAGYD
FKRDERSNQG RETTDDNNVW ARLRVNSFDM WDMWLKGSLS KRDGSEYKAS ESSSAEQNPL
LRRYYLADRD RTQIEARFNH SPLDNLNVDF GVRYALDDYT NTQIGLTESK DTNYDINLSY
MINDDMNVNT FYNHQIIKSA QSGSANLSIA TWQADIEDTV DVVGAGLSYN NLMDSRLRLG
LDYTYSDSDS NTQVRQGISG DYGDYFAKVH NINVYAQYQA TEKMALRIDY KMEKYLDNDD
ANDIEPDTIW NVMSFGNLQH DYTAHMIMLN VNYSL
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