Gene Sfri_2546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2546 
Symbol 
ID4279454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp3050341 
End bp3050688 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content47% 
IMG OID638135340 
Producthypothetical protein 
Protein accessionYP_751226 
Protein GI114563713 
COG category[R] General function prediction only 
COG ID[COG0727] Predicted Fe-S-cluster oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.211724 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCACCA ATATCATTAC CATGTTCCCT GAGTCGTCCG ATAAATCATC GACTCCCGCA 
TCGATAAGCG CTGTAGAGCA ACCTGCAGCT GTGACCTGTT CAAATTGCCA AGCCTGTTGT
TGCCGCTTAG AAGTAATGTT AATAACCGAA ACTGGTGTGC CTAAAGTGTA TATAGCCAAA
GATAATTGGG GCGGAGAAGT GATGCGCCGA CTTGATGATG GTTGGTGTGC AGCGCTAGAC
CGAGACACGA TGATGTGTTC GATTTACGAA GTTCGGCCGC TGATATGCCG TGAATTTGAA
ATGGCTGAAT ACGAATGTGT TTCTGAACGC GAAGCCTTTG GCATTTAA
 
Protein sequence
MPTNIITMFP ESSDKSSTPA SISAVEQPAA VTCSNCQACC CRLEVMLITE TGVPKVYIAK 
DNWGGEVMRR LDDGWCAALD RDTMMCSIYE VRPLICREFE MAEYECVSER EAFGI