Gene Sfri_2536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2536 
Symbol 
ID4279445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp3039991 
End bp3040749 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content36% 
IMG OID638135331 
Producthypothetical protein 
Protein accessionYP_751217 
Protein GI114563704 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.584503 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGAAA ATCCGAAACC ATCTGATTGG AAAGAACTGC AATCGGGAGT ATGCAGAATA 
TTAAATGAGG TTGGTATAGC TGCTGAAACG GAAAAGTCTA TTGAAACTCC TAGAGGAACA 
GTAGAGATAG ATGTATACGG CGTAGATGAA AGCAGCGTAG AAAAGATTAG GTATATTGTT 
GAATGTAAAA ACTGGGGAAG TTCAATTCCC CAGACAGTGG TACATGCGTT TACTAGCGTA 
CTCCATGAAA CAGGTGGCCA TATTGGGATC TTGATATCTA AGGAAGGGTT TCAAGAAGGA 
GCATTGAACT ACATTAAGCA TACAAATATT GTTGCTTTGA CATACGCAGA ATTCCAAGAA 
CGTTACTTTA AACTATGGTA TGTGAAAAAC TTCTGTGTTG AGATCCTTGG CGCTATAGAT 
GATCTATTGC AATACGTGGA ACCTATTAAT AGTCGAAGAC AAAGGTTTCT AAATGAACTC 
GATGATGAAA AAAAATCAGA ATATGAGTCT TTATCTAATC AATATCAAGT TTTCACCATG 
GTCATTGCTA TGTTAAGTGT GGACAAATTT GCCAAAAGTC ACGAGCCGAC TGCTCTTTTT 
GATATTGAAG ATTTTAAATC TAGGTTGGTT GATAACTTCG GAGAGGAATT TCGATATCAG 
GCAAGTTACT ATCGAGATTT AGTAATAGAG ATATCTGATC ATGCATCAAA AATTACTGAA 
AAGTTTCATG TGGTATTTGG TCGTAATATT TTCGCATAG
 
Protein sequence
MIENPKPSDW KELQSGVCRI LNEVGIAAET EKSIETPRGT VEIDVYGVDE SSVEKIRYIV 
ECKNWGSSIP QTVVHAFTSV LHETGGHIGI LISKEGFQEG ALNYIKHTNI VALTYAEFQE 
RYFKLWYVKN FCVEILGAID DLLQYVEPIN SRRQRFLNEL DDEKKSEYES LSNQYQVFTM 
VIAMLSVDKF AKSHEPTALF DIEDFKSRLV DNFGEEFRYQ ASYYRDLVIE ISDHASKITE 
KFHVVFGRNI FA