| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2520 |
|---|
| Symbol | |
|---|
| ID | 4279429 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | - |
|---|
| Start bp | 3015363 |
|---|
| End bp | 3015884 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 638135315 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_751201 |
|---|
| Protein GI | 114563688 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACATA CAGTCAGCAG CAGTACGTTA ATTAAAGCCG CTCTATCAGC GATTGTCGTA
GCAGGCATTG TTTTAGTTAC GCTAATTTTA CCCGCCGAAT ACAACATCGA TCCGACTGGT
ATTGGACAAA AAATAGGTGT CACAGTATTA GCGCAAGCGG CAGAACCAGA AGTGCAACAA
AGCGCTCCTG CCGAAGGCTC TAATGAGTTT CAAACGATAG AAGTGATGGT ACCTGCAGGG
CGTGGAATAG AATATAAATT CGACATGCAA CAATTTGAAA AAATGACCTA TGAATGGATA
ACAGATGGGA CGGCTTTATT TGTTGACCTC CATGGTGAGC CAAAGGGAGA TACCTCAGGA
TATTACGAAA GTTATGTCAT CGCGACGTCG GCTGATATGA AAGGTAGTTT TACGGCACCT
TTTGCTGGTT CCCACGGATG GTATTGGAAA AATAAGTCTA ATCAACCGGT AGCAGTGCAG
TTATTGGTAA AAGGACAATA CAAAGTCATC GGTTTAAAAT GA
|
|---|
| Protein sequence | MQHTVSSSTL IKAALSAIVV AGIVLVTLIL PAEYNIDPTG IGQKIGVTVL AQAAEPEVQQ
SAPAEGSNEF QTIEVMVPAG RGIEYKFDMQ QFEKMTYEWI TDGTALFVDL HGEPKGDTSG
YYESYVIATS ADMKGSFTAP FAGSHGWYWK NKSNQPVAVQ LLVKGQYKVI GLK
|
|---|
| |