Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2421 |
Symbol | hscB |
ID | 4279332 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 2887219 |
End bp | 2887743 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638135217 |
Product | co-chaperone HscB |
Protein accession | YP_751104 |
Protein GI | 114563591 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1076] DnaJ-domain-containing proteins 1 |
TIGRFAM ID | [TIGR00714] Fe-S protein assembly co-chaperone HscB |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTATT TCGATCTGTT TAATGTAGTA CCTGCCTTTG ATATCGACAC CGCCTTACTT GCAGAGCGCT ACCGCGAACT GCAACGGGCG GTTCATCCCG ATAAATTCGC TAATGATACC GAGCAACAAA AGCTGCTATC AGTTCAGCGA ACTGCACAAG TTAATGATGG TTATCAAACA TTAAAAAATC CCCTACGCCG TGCTGAACAC ATGTTGAGCT TGCGTGGAAT TGAATTAAGT CACGAAACCA CAACATTGAA AGATGGTGCA TTTTTGATGC AGCAAATGGA GTGGCGTGAA GCACTTGAAG ATATCCAACA CAATAGTGAT CCACAGTCAT CAATTGATGA ACTGTATGAG TCGTTTGGTG AGTTTGAGTC AACATTACTG ACTAAACTGG CGACGCTATT GATTAGTGAT GAAAGTGCAG ATGCTTTATT AGCGGCAGAT CAAATTCGTA AGTTAAAGTT TATGGCAAAA TTACATGATG AGTTAGCCCG TATTGAAGAT GGCTTGCTCG ATTAA
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Protein sequence | MNYFDLFNVV PAFDIDTALL AERYRELQRA VHPDKFANDT EQQKLLSVQR TAQVNDGYQT LKNPLRRAEH MLSLRGIELS HETTTLKDGA FLMQQMEWRE ALEDIQHNSD PQSSIDELYE SFGEFESTLL TKLATLLISD ESADALLAAD QIRKLKFMAK LHDELARIED GLLD
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