| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2387 |
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| Symbol | lpxK |
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| ID | 4279298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2847962 |
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| End bp | 2848969 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638135183 |
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| Product | tetraacyldisaccharide 4'-kinase |
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| Protein accession | YP_751070 |
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| Protein GI | 114563557 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1663] Tetraacyldisaccharide-1-P 4'-kinase |
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| TIGRFAM ID | [TIGR00682] tetraacyldisaccharide 4'-kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.624248 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAACAGC TTATTCATCG AATTTGGTAC CAAGGTCATC AGGCCAAATG GTTATTACTG
CCACTATCTG GGATATTTTG GTTCATCTCT TATATTAGGC GGTTACTGTT TAGTTTTGGG
TTTAAACAAG CGCAAGTATT ACCCGTACCC GTAATAGTGG TGGGTAATAT CACCGCGGGA
GGCAGTGGTA AAACCCCGAC AGTAATTTAT TTAATTGAAC TGTTACGCCA ACACGGTTAC
AAGCCAGGTG TAATAAGCCG AGGTTATGGG GTTAATGTTG ATGGTGTTGT TGCTGTTACT
CCTAATGCAA AAGCCAGTGA TGTAGGTGAT GAGCCTGCAA TGATAGTGGC TCGCACTCAA
GTGCCTATGG TTGTCGGCGC AAAGAGAGTG AGCGCTGCGC AAACATTATT AACAGACTTT
GATGTTGATG TAATTATTAG TGATGATGGC TTACAACATT ATGCCTTAGG CCGCGATATC
GAAATTGCTT TAGTGGATGG AGAGCGTCGT TATGGCAATC ACTGCTTGTT ACCCGCCGGT
CCTTTACGTG AAGGTTTGTG GCGGTTAAAT TCAGTTGATT TTGTGATAAA TAATGGCGGA
CCAGCTCAAA ACGGTGAAGT GCTGATGGCA CTAGAACCTG CACCGCTTTG TCTGGTTGAC
AACAATCTAC AAGATAAGTT TAATCAGCAA AATAGTGTCG TTGCAATGGC TGGTATTGGT
AACCCGCAAC GTTTCTTTAA TAGTATTAGC CAGTTAGGCT ATAAAGTAGT AAAAACAGTT
GAGTTCGCAG ATCACCAAGC TTTTGATCAA AAGCAATTAA GTGACTTATC CGTACAGCAT
TCATTATTAA TGACTGAAAA AGATGCGGTT AAATGTCGCG ATTTTGCACA ATCAAACTGG
TGGTATTTAC CTGTAAATGC GAAGCTTAAC TCAGAATTTG ATCACGCATT GTTGAGCCAA
TTACAGCAAG TGGCTCAAAC TAAAAAAGGA TTGTCTCATG GCATTTGA
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| Protein sequence | MQQLIHRIWY QGHQAKWLLL PLSGIFWFIS YIRRLLFSFG FKQAQVLPVP VIVVGNITAG
GSGKTPTVIY LIELLRQHGY KPGVISRGYG VNVDGVVAVT PNAKASDVGD EPAMIVARTQ
VPMVVGAKRV SAAQTLLTDF DVDVIISDDG LQHYALGRDI EIALVDGERR YGNHCLLPAG
PLREGLWRLN SVDFVINNGG PAQNGEVLMA LEPAPLCLVD NNLQDKFNQQ NSVVAMAGIG
NPQRFFNSIS QLGYKVVKTV EFADHQAFDQ KQLSDLSVQH SLLMTEKDAV KCRDFAQSNW
WYLPVNAKLN SEFDHALLSQ LQQVAQTKKG LSHGI
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