Gene Sfri_2387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2387 
SymbollpxK 
ID4279298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp2847962 
End bp2848969 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content42% 
IMG OID638135183 
Producttetraacyldisaccharide 4'-kinase 
Protein accessionYP_751070 
Protein GI114563557 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1663] Tetraacyldisaccharide-1-P 4'-kinase 
TIGRFAM ID[TIGR00682] tetraacyldisaccharide 4'-kinase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.624248 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACAGC TTATTCATCG AATTTGGTAC CAAGGTCATC AGGCCAAATG GTTATTACTG 
CCACTATCTG GGATATTTTG GTTCATCTCT TATATTAGGC GGTTACTGTT TAGTTTTGGG
TTTAAACAAG CGCAAGTATT ACCCGTACCC GTAATAGTGG TGGGTAATAT CACCGCGGGA
GGCAGTGGTA AAACCCCGAC AGTAATTTAT TTAATTGAAC TGTTACGCCA ACACGGTTAC
AAGCCAGGTG TAATAAGCCG AGGTTATGGG GTTAATGTTG ATGGTGTTGT TGCTGTTACT
CCTAATGCAA AAGCCAGTGA TGTAGGTGAT GAGCCTGCAA TGATAGTGGC TCGCACTCAA
GTGCCTATGG TTGTCGGCGC AAAGAGAGTG AGCGCTGCGC AAACATTATT AACAGACTTT
GATGTTGATG TAATTATTAG TGATGATGGC TTACAACATT ATGCCTTAGG CCGCGATATC
GAAATTGCTT TAGTGGATGG AGAGCGTCGT TATGGCAATC ACTGCTTGTT ACCCGCCGGT
CCTTTACGTG AAGGTTTGTG GCGGTTAAAT TCAGTTGATT TTGTGATAAA TAATGGCGGA
CCAGCTCAAA ACGGTGAAGT GCTGATGGCA CTAGAACCTG CACCGCTTTG TCTGGTTGAC
AACAATCTAC AAGATAAGTT TAATCAGCAA AATAGTGTCG TTGCAATGGC TGGTATTGGT
AACCCGCAAC GTTTCTTTAA TAGTATTAGC CAGTTAGGCT ATAAAGTAGT AAAAACAGTT
GAGTTCGCAG ATCACCAAGC TTTTGATCAA AAGCAATTAA GTGACTTATC CGTACAGCAT
TCATTATTAA TGACTGAAAA AGATGCGGTT AAATGTCGCG ATTTTGCACA ATCAAACTGG
TGGTATTTAC CTGTAAATGC GAAGCTTAAC TCAGAATTTG ATCACGCATT GTTGAGCCAA
TTACAGCAAG TGGCTCAAAC TAAAAAAGGA TTGTCTCATG GCATTTGA
 
Protein sequence
MQQLIHRIWY QGHQAKWLLL PLSGIFWFIS YIRRLLFSFG FKQAQVLPVP VIVVGNITAG 
GSGKTPTVIY LIELLRQHGY KPGVISRGYG VNVDGVVAVT PNAKASDVGD EPAMIVARTQ
VPMVVGAKRV SAAQTLLTDF DVDVIISDDG LQHYALGRDI EIALVDGERR YGNHCLLPAG
PLREGLWRLN SVDFVINNGG PAQNGEVLMA LEPAPLCLVD NNLQDKFNQQ NSVVAMAGIG
NPQRFFNSIS QLGYKVVKTV EFADHQAFDQ KQLSDLSVQH SLLMTEKDAV KCRDFAQSNW
WYLPVNAKLN SEFDHALLSQ LQQVAQTKKG LSHGI