Gene Sfri_2347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2347 
Symbol 
ID4279259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp2795924 
End bp2796319 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content44% 
IMG OID638135144 
Productsuccinate dehydrogenase, cytochrome b subunit 
Protein accessionYP_751031 
Protein GI114563518 
COG category[C] Energy production and conversion 
COG ID[COG2009] Succinate dehydrogenase/fumarate reductase, cytochrome b subunit 
TIGRFAM ID[TIGR02970] succinate dehydrogenase, cytochrome b556 subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.270921 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCTGA GTGAGCAGAA CGTGAAAAAG CAAAGACCTG TCCATCTAGA CCTGCAGACG 
ATAAGCTTTC CTGCGACAGC TATCGCATCA ATACTGCACC GTATTTCCGG TGTTATCATG 
CTATTTGCTA TTGGTATCCT TCTTTGGTTG TTAAATTCGA CTTTAACATC AGCAGATGGG 
TTCGCTAGCG TACAATCCTT GTTCGATGGT TTCGTGATGA AGTTCATCAT TTGGGGCATT 
CTAACCGCGT TGGGTTATCA CTTATTAGGT GGCATTCGTC ATTTGATTAT GGATGCCGGA 
CACTGGGAAG AGTTAGCTTC GGGTGTCTCA TCAGCTAAGG CTACGTTTGT GTTAGCAGTA 
GTCTTTTCAA TCATAGCGGG GATTTGGGTA TGGTAA
 
Protein sequence
MELSEQNVKK QRPVHLDLQT ISFPATAIAS ILHRISGVIM LFAIGILLWL LNSTLTSADG 
FASVQSLFDG FVMKFIIWGI LTALGYHLLG GIRHLIMDAG HWEELASGVS SAKATFVLAV 
VFSIIAGIWV W