| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2329 |
|---|
| Symbol | |
|---|
| ID | 4279241 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | - |
|---|
| Start bp | 2771701 |
|---|
| End bp | 2772879 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 638135126 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_751013 |
|---|
| Protein GI | 114563500 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3146] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.653635 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAACAAA CACAAACGCG AGTTTATCAA TATAAATTTG TTAATAGTAT TAGCAATATA
GATTCTTTAA TATGGAATAT CTTTTTTGGA TCATCTCATC CTTTTACCCG GCATGAATAT
TTATCCGCTC TGGAAATGAG TCGCTGTGTT AGCACTGAAA CGGGTTGGAC GCCGATGCAC
CTTATTGTGA TGGATGGCGA TAATATTATT GCATTAATGC CCTTGTACCT TAAAAGTCAT
TCTTGGGGGG AATATGTGTT TGATTGGGCA TGGGCAGAAG CTTATGAGCG TCATAATATA
GGCTATTACC CTAAGCTTGT GGGCAGTATA CCTTTTACTC CTACAACTGG GCGGCGTATT
GGTATTGACC CAAGGTTACC AAAACACGAT CAACAGCCCT TGATTGACGG CATTCAAACC
TATCTGTCAC AAACTGTCAT TAAACAGGGC TGGTCATCTT GGCATTGTTT ATTTACCAAT
ACCGAGCAAC ATCTACAGTT TGCACAAGCA GGGGTAATGG AGCGTGTTGG TTGTCAGTTT
CATTGGCACA ACCAAAATTA TGCTGATTTT AATGACTTTC TTAGTACATT AACGTCACGT
AAACGCAAAA ACATCACTAA AGAACGAATT TCTGCAAGGC AACAGCTACA ATTCCGATTT
ATAGATGGCG ATAAGGCGAG TGCACAGCAA TGGCAGAATT TTGTGCGTTG TTATCAAAAT
ACTTATTTAA AGCGTTCTGG TCATAAAGGG TACTTGTCGG CAGCATTCTT TGAGCAGATA
GCAGCAACAA TGGGCTCAAT GATACGATTA TTATTGATTG AAAATAGTGA CGCACAATTA
GTGGCATCAG CATTATATTT TGTGTCAGAC ACGCATTTAT ATGGTCGTTA TTGGGGGGCG
TTAACAGAAT GCGACTATGT CCATTTTGAA GCATGTTATT ACCAAGGCAT TGAGTACGCT
ATCGCTAATC AATTATTAGT ATTTGATGCA GGAGCACAAG GCGAACATAA AGTGGCTCGA
GGTTTTCGTC CTGTGAAAAC CACCTCAAGC CATTTTGTTG CTCATGAAGG TTTTAATGAT
GCCATCGGTG CTTTTTGTCA ACAAGAGCAA GCTCATATCG ACATTTATAT ACAGCAAATG
TGCGAACAAC TGCCGTATAA GTCAATTGAT AATACATAA
|
|---|
| Protein sequence | MEQTQTRVYQ YKFVNSISNI DSLIWNIFFG SSHPFTRHEY LSALEMSRCV STETGWTPMH
LIVMDGDNII ALMPLYLKSH SWGEYVFDWA WAEAYERHNI GYYPKLVGSI PFTPTTGRRI
GIDPRLPKHD QQPLIDGIQT YLSQTVIKQG WSSWHCLFTN TEQHLQFAQA GVMERVGCQF
HWHNQNYADF NDFLSTLTSR KRKNITKERI SARQQLQFRF IDGDKASAQQ WQNFVRCYQN
TYLKRSGHKG YLSAAFFEQI AATMGSMIRL LLIENSDAQL VASALYFVSD THLYGRYWGA
LTECDYVHFE ACYYQGIEYA IANQLLVFDA GAQGEHKVAR GFRPVKTTSS HFVAHEGFND
AIGAFCQQEQ AHIDIYIQQM CEQLPYKSID NT
|
|---|
| |